Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_H21
(548 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g19110.1 68414.m02377 inter-alpha-trypsin inhibitor heavy cha... 49 2e-06
At5g60710.1 68418.m07618 zinc finger (C3HC4-type RING finger) fa... 43 1e-04
At1g08050.1 68414.m00879 zinc finger (C3HC4-type RING finger) fa... 42 2e-04
At2g38970.1 68415.m04789 zinc finger (C3HC4-type RING finger) fa... 40 8e-04
At2g22680.1 68415.m02688 zinc finger (C3HC4-type RING finger) fa... 40 0.001
At3g54780.2 68416.m06062 zinc finger (C3HC4-type RING finger) fa... 40 0.001
At3g54780.1 68416.m06061 zinc finger (C3HC4-type RING finger) fa... 40 0.001
At1g72500.1 68414.m08383 inter-alpha-trypsin inhibitor heavy cha... 38 0.006
At1g08520.1 68414.m00943 magnesium-chelatase subunit chlD, chlor... 31 0.51
At5g63620.1 68418.m07987 oxidoreductase, zinc-binding dehydrogen... 29 2.7
At5g63620.2 68418.m07988 oxidoreductase, zinc-binding dehydrogen... 28 4.7
At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding famil... 28 4.7
At5g65950.1 68418.m08302 expressed protein 27 6.2
At5g48320.1 68418.m05969 DC1 domain-containing protein contains ... 27 6.2
At4g21210.1 68417.m03066 expressed protein contains Pfam domain ... 27 6.2
At4g18490.1 68417.m02742 hypothetical protein 27 6.2
At4g14030.1 68417.m02168 selenium-binding protein, putative cont... 27 6.2
At4g18700.1 68417.m02765 CBL-interacting protein kinase 12 (CIPK... 27 8.3
At3g20290.1 68416.m02571 calcium-binding EF hand family protein ... 27 8.3
>At1g19110.1 68414.m02377 inter-alpha-trypsin inhibitor heavy
chain-related similar to SP|Q61704 Inter-alpha-trypsin
inhibitor heavy chain H3 precursor {Mus musculus};
contains Pfam profile PF00092: von Willebrand factor
type A domain
Length = 754
Score = 49.2 bits (112), Expect = 2e-06
Identities = 22/43 (51%), Positives = 33/43 (76%)
Frame = +1
Query: 124 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 252
VVFV+D S SM+G+ +E +K A+ T L++L+PGD F+II F +
Sbjct: 329 VVFVVDISKSMTGKPLEDVKNAISTALSKLDPGDSFNIITFSN 371
>At5g60710.1 68418.m07618 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|P97280
Inter-alpha-trypsin inhibitor heavy chain H3 precursor
{Mesocricetus auratus}; contains Pfam profiles PF00097:
Zinc finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 704
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +1
Query: 124 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 252
+V VLD SGSM+G K+ LK AM ++ L P D S+I F S
Sbjct: 253 LVTVLDVSGSMAGTKLALLKRAMGFVIQNLGPFDRLSVISFSS 295
>At1g08050.1 68414.m00879 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|P79263
Inter-alpha-trypsin inhibitor heavy chain H4 precursor
{Sus scrofa}; contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 641
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +1
Query: 124 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFESI 255
++ VLD SGSM G KME +K AM ++ L D S+I F S+
Sbjct: 205 LITVLDVSGSMDGVKMELMKNAMSFVIQNLGETDRLSVISFSSM 248
>At2g38970.1 68415.m04789 zinc finger (C3HC4-type RING finger)
family protein very low similarity to SP|P97280
Inter-alpha-trypsin inhibitor heavy chain H3 precursor
{Mesocricetus auratus}; contains Pfam profiles PF00097:
Zinc finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 692
Score = 40.3 bits (90), Expect = 8e-04
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Frame = +1
Query: 124 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES----IITVHELSEADKE 291
+V VLD SGSM+G K+ LK AM ++ L D S+I F S + + ++S+A ++
Sbjct: 254 LVTVLDISGSMAGTKLALLKRAMGFVIQNLGSNDRLSVIAFSSTARRLFPLTKMSDAGRQ 313
Query: 292 K 294
+
Sbjct: 314 R 314
>At2g22680.1 68415.m02688 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 683
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +1
Query: 124 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 252
+V VLD SG SG K+E LK+ M +L+ L D SII F S
Sbjct: 303 LVAVLDVSGRNSGGKLEMLKQTMRIVLSNLREMDRLSIIAFSS 345
>At3g54780.2 68416.m06062 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|P79263
Inter-alpha-trypsin inhibitor heavy chain H4 precursor
{Sus scrofa}; contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 676
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +1
Query: 124 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 252
+V VLD SGSM G K+ LK AM ++ L D S+I F S
Sbjct: 245 LVTVLDISGSMGGTKLALLKRAMGFVIQNLGSSDRLSVIAFSS 287
>At3g54780.1 68416.m06061 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|P79263
Inter-alpha-trypsin inhibitor heavy chain H4 precursor
{Sus scrofa}; contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 675
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +1
Query: 124 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 252
+V VLD SGSM G K+ LK AM ++ L D S+I F S
Sbjct: 244 LVTVLDISGSMGGTKLALLKRAMGFVIQNLGSSDRLSVIAFSS 286
>At1g72500.1 68414.m08383 inter-alpha-trypsin inhibitor heavy
chain-related low similarity to Inter-alpha-inhibitor H4
heavy chain [Rattus norvegicus] GI:2292988; contains
Pfam profile PF00092: von Willebrand factor type A
domain
Length = 758
Score = 37.5 bits (83), Expect = 0.006
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +1
Query: 124 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFESII 258
VVFV+D S SM + +E +K+A+ L +L D F+II F I
Sbjct: 329 VVFVIDISASMKWKPLEDVKKALLECLAKLQAEDVFNIIAFNDEI 373
>At1g08520.1 68414.m00943 magnesium-chelatase subunit chlD,
chloroplast, putative / Mg-protoporphyrin IX chelatase,
putative (CHLD) similar to Mg-chelatase SP|O24133 from
Nicotiana tabacum, GB:AF014399 GI:2318116 from [Pisum
sativum]
Length = 760
Score = 31.1 bits (67), Expect = 0.51
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 124 VVFVLDTSGSMSGRKMEQLKEAMYTILNE-LNPGDYFSIIDF 246
V+FV+D SGSM+ +M+ K A +L E D SII F
Sbjct: 559 VIFVVDASGSMALNRMQNAKGAALKLLAESYTSRDQVSIIPF 600
>At5g63620.1 68418.m07987 oxidoreductase, zinc-binding dehydrogenase
family protein contains PFAM zinc-binding dehydrogenase
domain PF00107
Length = 427
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 382 KAKII-ISRLESIGGTDINTALTVAVDLINKYAGGNARQDV 501
KA +I +S+ S+G DIN + + +I Y GG ARQD+
Sbjct: 340 KAVMIGLSQAGSVGEIDINRLVRRKIKVIGSY-GGRARQDL 379
>At5g63620.2 68418.m07988 oxidoreductase, zinc-binding dehydrogenase
family protein contains PFAM zinc-binding dehydrogenase
domain PF00107
Length = 427
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 382 KAKII-ISRLESIGGTDINTALTVAVDLINKYAGGNARQDV 501
KA +I +S+ S+G DIN + V +I Y GG ARQD+
Sbjct: 340 KAVMIGLSQAGSVGEIDINRLVRRKVWVIGSY-GGRARQDL 379
>At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding family
protein / CHD family protein similar to chromatin
remodeling factor CHD3 (PICKLE) [Arabidopsis thaliana]
GI:6478518; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00628: PHD-finger, PF00385:
'chromo' (CHRromatin Organization MOdifier)
Length = 2228
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 154 MSGRKMEQLKEAMYTILNELNPGDYFSIIDFESIITVHELSEADK 288
++G ++ MY +LN L P + S+ FE H+L+ A+K
Sbjct: 842 LTGTPLQNNIGEMYNLLNFLQPSSFPSLSSFEE--RFHDLTSAEK 884
>At5g65950.1 68418.m08302 expressed protein
Length = 865
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/73 (20%), Positives = 35/73 (47%)
Frame = +1
Query: 172 EQLKEAMYTILNELNPGDYFSIIDFESIITVHELSEADKEKTRYKYFYYNEIQPKLDLVA 351
+++ + +I + G + +++ IT+H ++ D+E TRY +Q L ++A
Sbjct: 70 QEIDSSSASITPSVYVGQFAQLLEKGEAITLHSIT--DEEYTRYTISEAKRVQDSLQIIA 127
Query: 352 PYQATPENIEKAK 390
+ + E+ K
Sbjct: 128 WLKRSYESFTNLK 140
>At5g48320.1 68418.m05969 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 977
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +1
Query: 214 NPGDYFSIIDFESIITVHELSEADKEKTRYKYFYYNEIQPKLDLVAPYQATPE 372
N G Y +I E + + L E D Y Y +E+ LD+ +A P+
Sbjct: 309 NSGTYSNIEHLEMDLNIEHL-EMDSNSDTYVYIKLSELDSDLDIEFDLEADPD 360
>At4g21210.1 68417.m03066 expressed protein contains Pfam domain
PF03618: Domain of unknown function (DUF299)
Length = 403
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 361 ATPENIEKAKIIISRLESIGGTDINTAL 444
A PEN+EKA I++ + G T ++T L
Sbjct: 255 ALPENLEKADIVLVGVSRTGKTPLSTYL 282
>At4g18490.1 68417.m02742 hypothetical protein
Length = 594
Score = 27.5 bits (58), Expect = 6.2
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +1
Query: 247 ESIITVHELSEADKEKTRYKYFYYNEIQPKLDLVAPYQATPENIEKAKIIISRLESIGGT 426
ES I E KE + K Y N L++ P +NIEKA+ LE
Sbjct: 486 ESRIDTKTTKEPVKESPQTKSHYQNINMANLEI--PITENADNIEKAEAYTKELE----- 538
Query: 427 DINTALTVAVDLIN 468
++N AL ++++N
Sbjct: 539 NVNRALFSIMNILN 552
>At4g14030.1 68417.m02168 selenium-binding protein, putative
contains Pfam profile PF05694: 56kDa selenium binding
protein (SBP56); identical to Putative selenium-binding
protein (Swiss-Prot:O23264) [Arabidopsis thaliana];
similar to selenium binding protein (GI:15485232)
[Arabidopsis thaliana]; identical to cDNA from partial
mRNA for selenium binding protein (sbp gene) GI:15485231
Length = 490
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 10 GQFVVQYDVDRPKDGQILVNDGYFVHF-FAPDLPPL 114
G ++Q DVD K G + +N +FV F PD P L
Sbjct: 439 GSHIIQIDVDTEKGG-LTINPDFFVDFGDEPDGPSL 473
>At4g18700.1 68417.m02765 CBL-interacting protein kinase 12 (CIPK12)
identical to CBL-interacting protein kinase 12
[Arabidopsis thaliana] gi|13249123|gb|AAK16687; contains
Pfam profiles PF00069: Protein kinase domain and
PF03822: NAF domain; identical to cDNA CBL-interacting
protein kinase 12 (CIPK12) GI:13249122
Length = 489
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 235 IIDFESIITVHELSEADKEKTRYKYFYYNEIQPKL 339
I + + V E+ + +KT Y+ F NE++PKL
Sbjct: 418 IFELTPSLVVVEVKKKGGDKTEYEDFCNNELKPKL 452
>At3g20290.1 68416.m02571 calcium-binding EF hand family protein
similar to EH-domain containing protein 1 from {Mus
musculus} SP|Q9WVK4 and {Homo sapiens} SP|Q9H4M9,
receptor-mediated endocytosis 1 from [Caenorhabditis
elegans] GI:13487775, GI:13487777, GI:13487779; contains
INTERPRO:IPR002048 calcium-binding EF-hand domain
Length = 545
Score = 27.1 bits (57), Expect = 8.3
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +1
Query: 22 VQYDVDRPKDGQILVNDGYFVHFFAPDLP-PLNKYVVFVLDTSGSMSGRKMEQLKEAMYT 198
V D P G + F +P PL ++V FV DT G +SG K + +T
Sbjct: 253 VAVQADMPFSGLTTFGTAFLSKFECSQMPHPLLEHVTFV-DTPGVLSGEKQRTQRAYDFT 311
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.138 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,823,957
Number of Sequences: 28952
Number of extensions: 241785
Number of successful extensions: 668
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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