Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_H19
         (643 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g60360.1 68418.m07568 cysteine proteinase, putative / AALP pr...    33   0.21 
At4g11320.1 68417.m01828 cysteine proteinase, putative contains ...    33   0.21 
At4g11310.1 68417.m01827 cysteine proteinase, putative contains ...    33   0.21 
At5g43060.1 68418.m05256 cysteine proteinase, putative / thiol p...    32   0.37 
At4g23520.1 68417.m03390 cysteine proteinase, putative contains ...    32   0.37 
At3g45310.1 68416.m04892 cysteine proteinase, putative similar t...    31   0.86 
At4g36880.1 68417.m05229 cysteine proteinase, putative strong si...    29   2.6  
At5g05380.1 68418.m00580 prenylated rab acceptor (PRA1) family p...    29   3.5  
At5g50260.1 68418.m06224 cysteine proteinase, putative similar t...    28   4.6  
At4g31590.1 68417.m04487 glycosyl transferase family 2 protein s...    28   4.6  

>At5g60360.1 68418.m07568 cysteine proteinase, putative / AALP
           protein (AALP) identical to AALP protein GI:7230640 from
           [Arabidopsis thaliana]; similar to barley aleurain
          Length = 358

 Score = 32.7 bits (71), Expect = 0.21
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = +3

Query: 3   DLGYIKMARNRNNHCGIASAASYPLV 80
           D GY KM   +N  CGIA+ ASYP+V
Sbjct: 333 DKGYFKMEMGKNM-CGIATCASYPVV 357


>At4g11320.1 68417.m01828 cysteine proteinase, putative contains
           similarity to cysteine proteinase RD21A (thiol protease)
           GI:435619, SP:P43297 from [Arabidopsis thaliana]
          Length = 371

 Score = 32.7 bits (71), Expect = 0.21
 Identities = 17/28 (60%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
 Frame = +3

Query: 3   DLGYIKMARNRNNH---CGIASAASYPL 77
           + GY+KMARN  N    CGIA  ASYPL
Sbjct: 332 EAGYMKMARNIANPRGLCGIAMRASYPL 359


>At4g11310.1 68417.m01827 cysteine proteinase, putative contains
           similarity to cysteine proteinase RD21A (thiol protease)
           GI:435619, SP:P43297 from [Arabidopsis thaliana]
          Length = 364

 Score = 32.7 bits (71), Expect = 0.21
 Identities = 17/28 (60%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
 Frame = +3

Query: 3   DLGYIKMARNRNNH---CGIASAASYPL 77
           + GY+KMARN  N    CGIA  ASYPL
Sbjct: 325 EAGYMKMARNIANPRGLCGIAMRASYPL 352


>At5g43060.1 68418.m05256 cysteine proteinase, putative / thiol
           protease, putative similar to cysteine proteinase RD21A
           precursor (thiol protease) GI:435619, SP:P43297 from
           [Arabidopsis thaliana]
          Length = 463

 Score = 31.9 bits (69), Expect = 0.37
 Identities = 16/26 (61%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
 Frame = +3

Query: 9   GYIKMARN---RNNHCGIASAASYPL 77
           GYIKMARN       CGIA  ASYP+
Sbjct: 328 GYIKMARNIEAPTGKCGIAMEASYPI 353


>At4g23520.1 68417.m03390 cysteine proteinase, putative contains
           similarity to cysteine proteinase (thiol protease) RD21A
           GI:435619, SP:P43297 from [Arabidopsis thaliana]
          Length = 356

 Score = 31.9 bits (69), Expect = 0.37
 Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
 Frame = +3

Query: 3   DLGYIKMARNRNNH---CGIASAASYPL 77
           D GYIK+ARN  +    CGIA  ASYP+
Sbjct: 322 DAGYIKIARNFEDPKGLCGIAMLASYPI 349


>At3g45310.1 68416.m04892 cysteine proteinase, putative similar to
           AALP protein GI:7230640 from [Arabidopsis thaliana] and
           barley aleurain
          Length = 358

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +3

Query: 3   DLGYIKMARNRNNHCGIASAASYPLV 80
           D GY KM   +N  CG+A+ +SYP+V
Sbjct: 333 DNGYFKMEMGKNM-CGVATCSSYPVV 357


>At4g36880.1 68417.m05229 cysteine proteinase, putative strong
           similarity to cysteine proteinase COT44 precursor
           SP:P25251 from [Brassica napus] (Rape)
          Length = 376

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 4/27 (14%)
 Frame = +3

Query: 9   GYIKMARN----RNNHCGIASAASYPL 77
           GYI+M RN    ++  CGIA  ASYP+
Sbjct: 335 GYIRMERNLAASKSGKCGIAVEASYPV 361


>At5g05380.1 68418.m00580 prenylated rab acceptor (PRA1) family
           protein weak similarity to prenylated Rab acceptor 1
           (PRA1) [Homo sapiens] GI:4877285; contains Pfam profile
           PF03208: Prenylated rab acceptor (PRA1)
          Length = 217

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -2

Query: 333 FKI*QLTLGAVILLTFIYLRDVIIFFSLLLFCNYFFLILFRIPD 202
           FK+  +T+ +++L   +      +   L LFC + FL LFR  D
Sbjct: 79  FKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSD 122


>At5g50260.1 68418.m06224 cysteine proteinase, putative similar to
           cysteine endopeptidase precursor CysEP GI:2944446 from
           [Ricinus communis]
          Length = 361

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
 Frame = +3

Query: 9   GYIKMAR---NRNNHCGIASAASYPL 77
           GYI+M R   ++   CGIA  ASYPL
Sbjct: 317 GYIRMQRGIRHKEGLCGIAMEASYPL 342


>At4g31590.1 68417.m04487 glycosyl transferase family 2 protein
           similar to cellulose synthase from Agrobacterium
           tumeficiens [gi:710492] and Agrobacterium radiobacter
           [gi:710493]; contains Pfam glycosyl transferase, group 2
           family protein domain PF00535
          Length = 692

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = -2

Query: 306 AVILLTFIYLRDVII-FFSLLLFCNYFFLILFRIPDVKYNVYV 181
           A ++L F  LR +I+ F+S  LFC    L +F +P+ +  V+V
Sbjct: 485 ANLILLFFLLRKLILPFYSFTLFCIILPLTMF-VPEAELPVWV 526


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,861,003
Number of Sequences: 28952
Number of extensions: 133399
Number of successful extensions: 245
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1324661040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)