Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_H17
(650 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X54199-1|CAA38119.1| 1010|Homo sapiens glycinamide ribonucleotid... 103 4e-22
BC107712-1|AAI07713.1| 1010|Homo sapiens phosphoribosylglycinami... 103 4e-22
AB208785-1|BAD92022.1| 1046|Homo sapiens phosphoribosylglycinami... 103 4e-22
M32082-1|AAA60077.1| 302|Homo sapiens GART protein. 59 2e-08
AY083269-1|AAL89527.1| 352|Homo sapiens transcription factor ma... 31 4.7
AB086960-1|BAC20389.1| 352|Homo sapiens pancreatic beta-cell sp... 31 4.7
>X54199-1|CAA38119.1| 1010|Homo sapiens glycinamide ribonucleotide
synthetase-aminoimidazole ribonucleotide synthetase-
protein.
Length = 1010
Score = 103 bits (248), Expect = 4e-22
Identities = 51/116 (43%), Positives = 68/116 (58%)
Frame = +1
Query: 1 VARSVLAGIAEGCRQXXXXXXXXETAEMPGMYEPGVYDIAGFALGVVERSHILPRXXXXX 180
V +V+AGIA+ C + ETAEMP MY PG YD+AGFA+G +ER LP
Sbjct: 547 VTEAVVAGIAKACGKAGCALLGGETAEMPDMYPPGEYDLAGFAVGAMERDQKLPHLERIT 606
Query: 181 XXXXXXXLPSNGVHSNGFSLIHKLMKKNGLTLNDKAPFSQEGLTLGEELIKPTRIY 348
+ S+G+HSNGFSL+ K++ K+ L + AP TLG+ L+ PTRIY
Sbjct: 607 EGDVVVGIASSGLHSNGFSLVRKIVAKSSLQYSSPAPDGCGDQTLGDLLLTPTRIY 662
Score = 65.3 bits (152), Expect = 2e-10
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = +3
Query: 387 LNAHWWHLHPVFAWISDAGAVEDDEMLRTFNCGIGMVVIVSPEDQADVMNSMRSY--GAM 560
L+A W + VF+W+ G + ++EM RTFNCG+G V++VS E ++ ++ + A
Sbjct: 702 LDAQTWRIPRVFSWLQQEGHLSEEEMARTFNCGVGAVLVVSKEQTEQILRDIQQHKEEAW 761
Query: 561 VIGSVQARPPHGAPVLVDNFASGIDL 638
VIGSV AR V V N + +
Sbjct: 762 VIGSVVARAEGSPRVKVKNLIESMQI 787
>BC107712-1|AAI07713.1| 1010|Homo sapiens phosphoribosylglycinamide
formyltransferase, phosphoribosylglycinamide syntheta
protein.
Length = 1010
Score = 103 bits (248), Expect = 4e-22
Identities = 51/116 (43%), Positives = 68/116 (58%)
Frame = +1
Query: 1 VARSVLAGIAEGCRQXXXXXXXXETAEMPGMYEPGVYDIAGFALGVVERSHILPRXXXXX 180
V +V+AGIA+ C + ETAEMP MY PG YD+AGFA+G +ER LP
Sbjct: 547 VTEAVVAGIAKACGKAGCALLGGETAEMPDMYPPGEYDLAGFAVGAMERDQKLPHLERIT 606
Query: 181 XXXXXXXLPSNGVHSNGFSLIHKLMKKNGLTLNDKAPFSQEGLTLGEELIKPTRIY 348
+ S+G+HSNGFSL+ K++ K+ L + AP TLG+ L+ PTRIY
Sbjct: 607 EGDVVVGIASSGLHSNGFSLVRKIVAKSSLQYSSPAPDGCGDQTLGDLLLTPTRIY 662
Score = 65.3 bits (152), Expect = 2e-10
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = +3
Query: 387 LNAHWWHLHPVFAWISDAGAVEDDEMLRTFNCGIGMVVIVSPEDQADVMNSMRSY--GAM 560
L+A W + VF+W+ G + ++EM RTFNCG+G V++VS E ++ ++ + A
Sbjct: 702 LDAQTWRIPRVFSWLQQEGHLSEEEMARTFNCGVGAVLVVSKEQTEQILRGIQQHKEEAW 761
Query: 561 VIGSVQARPPHGAPVLVDNFASGIDL 638
VIGSV AR V V N + +
Sbjct: 762 VIGSVVARAEGSPRVKVKNLIESMQI 787
>AB208785-1|BAD92022.1| 1046|Homo sapiens phosphoribosylglycinamide
formyltransferase, phosphoribosylglycinamide syntheta
protein.
Length = 1046
Score = 103 bits (248), Expect = 4e-22
Identities = 51/116 (43%), Positives = 68/116 (58%)
Frame = +1
Query: 1 VARSVLAGIAEGCRQXXXXXXXXETAEMPGMYEPGVYDIAGFALGVVERSHILPRXXXXX 180
V +V+AGIA+ C + ETAEMP MY PG YD+AGFA+G +ER LP
Sbjct: 583 VTEAVVAGIAKACGKAGCALLGGETAEMPDMYPPGEYDLAGFAVGAMERDQKLPHLERIT 642
Query: 181 XXXXXXXLPSNGVHSNGFSLIHKLMKKNGLTLNDKAPFSQEGLTLGEELIKPTRIY 348
+ S+G+HSNGFSL+ K++ K+ L + AP TLG+ L+ PTRIY
Sbjct: 643 EGDVVVGIASSGLHSNGFSLVRKIVAKSSLQYSSPAPDGCGDQTLGDLLLTPTRIY 698
Score = 65.3 bits (152), Expect = 2e-10
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = +3
Query: 387 LNAHWWHLHPVFAWISDAGAVEDDEMLRTFNCGIGMVVIVSPEDQADVMNSMRSY--GAM 560
L+A W + VF+W+ G + ++EM RTFNCG+G V++VS E ++ ++ + A
Sbjct: 738 LDAQTWRIPRVFSWLQQEGHLSEEEMARTFNCGVGAVLVVSKEQTEQILRDIQQHKEEAW 797
Query: 561 VIGSVQARPPHGAPVLVDNFASGIDL 638
VIGSV AR V V N + +
Sbjct: 798 VIGSVVARAEGSPRVKVKNLIESMQI 823
>M32082-1|AAA60077.1| 302|Homo sapiens GART protein.
Length = 302
Score = 58.8 bits (136), Expect = 2e-08
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Frame = +3
Query: 417 VFAWISDAGAVEDDEMLRTFNCGIGMVVIVSPEDQADVMNSMRSY--GAMVIGSVQARPP 590
VF+W+ G + ++EM RTFNCG+G V++VS E ++ ++ + A VIGSV AR
Sbjct: 4 VFSWLQQEGHLSEEEMARTFNCGVGAVLVVSKEQTEQILRGIQQHKEEAWVIGSVVARAE 63
Query: 591 HGAPVLVDNFASGIDL 638
V V N + +
Sbjct: 64 GSPRVKVKNLIESMQI 79
>AY083269-1|AAL89527.1| 352|Homo sapiens transcription factor
mammalian MafA protein.
Length = 352
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -1
Query: 641 GEVYAGGEVVDEHGGAVRGPRLHAADHHCAVRTHAVHH 528
G +AGG D+ G HAA HH A H HH
Sbjct: 168 GPGFAGGGGADDMGAGHHHGAHHAAHHHHAAHHHHHHH 205
>AB086960-1|BAC20389.1| 352|Homo sapiens pancreatic beta-cell
specific transcriptional activator protein.
Length = 352
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -1
Query: 641 GEVYAGGEVVDEHGGAVRGPRLHAADHHCAVRTHAVHH 528
G +AGG D+ G HAA HH A H HH
Sbjct: 168 GPGFAGGGGADDMGAGHHHGAHHAAHHHHAAHHHHHHH 205
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,556,407
Number of Sequences: 237096
Number of extensions: 1186137
Number of successful extensions: 2168
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2168
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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