Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_H16
(658 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical pr... 37 0.014
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 33 0.24
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 33 0.24
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 30 1.3
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z83216-11|CAB05679.2| 404|Caenorhabditis elegans Hypothetical p... 29 3.8
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 28 5.1
Z81112-6|CAB03277.1| 673|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z77136-10|CAB00887.1| 673|Caenorhabditis elegans Hypothetical p... 28 6.7
>U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical
protein K02G10.5 protein.
Length = 655
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 386 IEKCAENCISTPEYNPVCGSDNK-TYKNQGRLFCAQNCGVKVTLARQAPCPSS 541
+E C+ENC +NPVC D+K T+ + CA G+K + C S
Sbjct: 442 LETCSENCHCDSFFNPVCSEDSKLTFLSPCHAGCADMPGIKFGASNWTNCGCS 494
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 416 TPEYNPVCGSDNKTYKNQGRL 478
T E+ VCGSD KTY N+ RL
Sbjct: 469 TDEFKEVCGSDGKTYSNECRL 489
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 392 KCAENCISTPEYNPVCGSDNKTYKNQ 469
KC+E C + VCG+D KTY N+
Sbjct: 318 KCSEQCTMNSAH--VCGTDGKTYLNE 341
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 416 TPEYNPVCGSDNKTYKNQGRL 478
T E+ VCGSD KTY N+ RL
Sbjct: 477 TDEFKEVCGSDGKTYSNECRL 497
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 392 KCAENCISTPEYNPVCGSDNKTYKNQ 469
KC+E C + VCG+D KTY N+
Sbjct: 326 KCSEQCTMNSAH--VCGTDGKTYLNE 349
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 321 KHRYQVKGKHQLLALVEHHDKQLRNARRIAFQHQNTTPCVVAIIKLTKTREDYF 482
+ R++ + +H AL +H ++L +R A + CV+++IK + E F
Sbjct: 81 EQRHRRRRRHNETALEDHLSEKLSREKRAAAHIMRSRKCVISVIKKMSSMECSF 134
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 404 NCISTPEYNPVCGSDNKTYKNQGRLFCAQ 490
+C PVCG+DN TY N L C Q
Sbjct: 18 DCDCPSVIRPVCGTDNVTYNNLCFLRCVQ 46
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 377 RQTIEKCAENCISTPEYNPVCGSDNKTYKN 466
R + + C NC +T E++PVC ++ Y+N
Sbjct: 109 RCSSKDCNHNCTNT-EFDPVCDTNGSVYRN 137
>Z83216-11|CAB05679.2| 404|Caenorhabditis elegans Hypothetical
protein C08F11.13 protein.
Length = 404
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Frame = +1
Query: 475 TILCPKLWSQSDFGQASPVPVFIKVILIKYNLYFILIKC----SIHYFVIWKLP*IAVFL 642
T++C L+S+ + SP V + + K+ L+F+LI C SI +VI K+ + VF
Sbjct: 307 TVIC--LFSKIVYFHKSPKNVETRFFMKKWYLWFLLINCVIWSSIPLYVIGKVGNV-VFS 363
Query: 643 CNTVF 657
N++F
Sbjct: 364 PNSLF 368
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -3
Query: 545 LMKTGTGLAWPKSL*LHNFGHKIVFPGFCKFYYRYHTRGCILVLKCNS 402
L KTG L K + ++NF K + G C RY + KCN+
Sbjct: 950 LKKTGVKLQTIKDIEMYNFIEKGIRGGICNAMLRYSRANNRHLKKCNT 997
>Z81112-6|CAB03277.1| 673|Caenorhabditis elegans Hypothetical
protein ZC376.3 protein.
Length = 673
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +2
Query: 401 ENCISTPEYNPVCGSD-NKTYKN 466
+ + T EY P C SD KTYKN
Sbjct: 73 DGILETKEYKPACMSDAKKTYKN 95
>Z77136-10|CAB00887.1| 673|Caenorhabditis elegans Hypothetical
protein ZC376.3 protein.
Length = 673
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +2
Query: 401 ENCISTPEYNPVCGSD-NKTYKN 466
+ + T EY P C SD KTYKN
Sbjct: 73 DGILETKEYKPACMSDAKKTYKN 95
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,030,971
Number of Sequences: 27780
Number of extensions: 362676
Number of successful extensions: 883
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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