Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_H14
         (565 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73426-7|CAB60290.1|  338|Caenorhabditis elegans Hypothetical pr...   194   3e-50
AL110480-3|CAB60328.1|  338|Caenorhabditis elegans Hypothetical ...   194   3e-50
Z49912-5|CAA90136.1|  312|Caenorhabditis elegans Hypothetical pr...    41   7e-04
AF047657-12|AAK18941.3|  367|Caenorhabditis elegans Serpentine r...    29   1.7  
U21321-5|AAL11111.1|  553|Caenorhabditis elegans Hypothetical pr...    27   7.0  
U21321-4|AAG00049.1|  587|Caenorhabditis elegans Hypothetical pr...    27   7.0  

>Z73426-7|CAB60290.1|  338|Caenorhabditis elegans Hypothetical
           protein Y24F12A.2 protein.
          Length = 338

 Score =  194 bits (474), Expect = 3e-50
 Identities = 90/188 (47%), Positives = 133/188 (70%)
 Frame = +1

Query: 1   LVFVIDAQDDYQDALDKLQLTVTKAYRVNSNIKFEVFIHKVDGLNDDYKMESQRDIHHRA 180
           L+F+IDAQ + Q+ +  L     +AY++N NIKFEVF+HK DGL ++ ++E++ +I+H+ 
Sbjct: 104 LLFIIDAQAELQEPIATLVEYFCRAYKINQNIKFEVFVHKADGLTEEARVETKFNIYHQV 163

Query: 181 TDDLAEAGLEHVHLSFHLTSIYDHSIFEAFSKVVQKLIPQLPTLEXXXXXXXXXXGIEKA 360
            + + +     + +++HLTSIYDHSIFEAFSKVVQ L+ QLPTLE           + K+
Sbjct: 164 KETIKDQIDVDLQVTYHLTSIYDHSIFEAFSKVVQNLVKQLPTLERLLDVFNNSSKVTKS 223

Query: 361 FLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVXDISCIYGMVDETEANTFNNQSSSLIK 540
           FLFD++SKIYIATDS PV+M  YELCCDMIDV  D+S IYG+ +    + ++ +SSS+I+
Sbjct: 224 FLFDILSKIYIATDSEPVEMSIYELCCDMIDVTLDLSSIYGVAE--NGSNYDERSSSVIR 281

Query: 541 LNNGTVLY 564
           L +  V++
Sbjct: 282 LKSEQVMF 289


>AL110480-3|CAB60328.1|  338|Caenorhabditis elegans Hypothetical
           protein Y24F12A.2 protein.
          Length = 338

 Score =  194 bits (474), Expect = 3e-50
 Identities = 90/188 (47%), Positives = 133/188 (70%)
 Frame = +1

Query: 1   LVFVIDAQDDYQDALDKLQLTVTKAYRVNSNIKFEVFIHKVDGLNDDYKMESQRDIHHRA 180
           L+F+IDAQ + Q+ +  L     +AY++N NIKFEVF+HK DGL ++ ++E++ +I+H+ 
Sbjct: 104 LLFIIDAQAELQEPIATLVEYFCRAYKINQNIKFEVFVHKADGLTEEARVETKFNIYHQV 163

Query: 181 TDDLAEAGLEHVHLSFHLTSIYDHSIFEAFSKVVQKLIPQLPTLEXXXXXXXXXXGIEKA 360
            + + +     + +++HLTSIYDHSIFEAFSKVVQ L+ QLPTLE           + K+
Sbjct: 164 KETIKDQIDVDLQVTYHLTSIYDHSIFEAFSKVVQNLVKQLPTLERLLDVFNNSSKVTKS 223

Query: 361 FLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVXDISCIYGMVDETEANTFNNQSSSLIK 540
           FLFD++SKIYIATDS PV+M  YELCCDMIDV  D+S IYG+ +    + ++ +SSS+I+
Sbjct: 224 FLFDILSKIYIATDSEPVEMSIYELCCDMIDVTLDLSSIYGVAE--NGSNYDERSSSVIR 281

Query: 541 LNNGTVLY 564
           L +  V++
Sbjct: 282 LKSEQVMF 289


>Z49912-5|CAA90136.1|  312|Caenorhabditis elegans Hypothetical
           protein T24F1.1 protein.
          Length = 312

 Score = 40.7 bits (91), Expect = 7e-04
 Identities = 30/139 (21%), Positives = 67/139 (48%), Gaps = 7/139 (5%)
 Frame = +1

Query: 1   LVFVIDAQD-DYQDALDKLQLTVTKAYRVNSNIKFEVFIHKVDGLNDDYKMES--QRDIH 171
           L++V D +  +++  L   Q  +    + + N +    IHK+D + +D + E+  +R+  
Sbjct: 85  LIYVFDVESREFEKDLRYYQSCLEALLQNSPNAQVFCLIHKMDLIEEDKREETFKRREAD 144

Query: 172 HRATDDLAEAGLEHVHLSF----HLTSIYDHSIFEAFSKVVQKLIPQLPTLEXXXXXXXX 339
                +LA   L++   +       +SI+D ++++A+S +V  L+P + T+E        
Sbjct: 145 VLRYSELAATPLQNERTNAVCQCFKSSIWDETLYKAWSAIVYHLVPNVGTMEDKLKKFGA 204

Query: 340 XXGIEKAFLFDVVSKIYIA 396
               ++  LF+  + + IA
Sbjct: 205 ILDADEVILFERATFLVIA 223


>AF047657-12|AAK18941.3|  367|Caenorhabditis elegans Serpentine
           receptor, class w protein4 protein.
          Length = 367

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = +1

Query: 115 HKVDGLNDDYKME-SQRDIHHRATDDLAEAGLEHVHLSFHLTSIYDHSIFEAFSKVVQKL 291
           HK+DG N DY  + ++  +       L +  LEH+H    +TSIY   I +A   ++  +
Sbjct: 180 HKIDGRNIDYDCDGNEVHLSQLRFMVLVDTSLEHLHSI--ITSIY--GIIKALPSLIDPI 235

Query: 292 IPQLPTLE 315
           +  L  +E
Sbjct: 236 LTVLLIIE 243


>U21321-5|AAL11111.1|  553|Caenorhabditis elegans Hypothetical
           protein ZK177.8b protein.
          Length = 553

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +1

Query: 346 GIEKAFLFDVVSKIYIATDSSPVD 417
           G EK+FLFDVVS  Y   D   +D
Sbjct: 203 GPEKSFLFDVVSNSYNGHDVDKMD 226


>U21321-4|AAG00049.1|  587|Caenorhabditis elegans Hypothetical
           protein ZK177.8a protein.
          Length = 587

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +1

Query: 346 GIEKAFLFDVVSKIYIATDSSPVD 417
           G EK+FLFDVVS  Y   D   +D
Sbjct: 237 GPEKSFLFDVVSNSYNGHDVDKMD 260


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,014,008
Number of Sequences: 27780
Number of extensions: 213441
Number of successful extensions: 558
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)