Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_H12
         (359 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z11115-2|CAA77450.1|  599|Caenorhabditis elegans Hypothetical pr...    29   0.98 
AF016673-5|AAB66123.1|  684|Caenorhabditis elegans Hypothetical ...    29   1.3  
Z35663-8|CAA84728.1|  249|Caenorhabditis elegans Hypothetical pr...    27   3.0  
AF099919-4|AAC68791.1|  230|Caenorhabditis elegans Hypothetical ...    27   3.9  
AF016428-7|AAB65361.1|  439|Caenorhabditis elegans Dnaj domain (...    26   6.9  
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e...    26   6.9  
Z98866-13|CAB11552.1|  327|Caenorhabditis elegans Hypothetical p...    26   9.1  

>Z11115-2|CAA77450.1|  599|Caenorhabditis elegans Hypothetical
           protein ZK637.3 protein.
          Length = 599

 Score = 29.1 bits (62), Expect = 0.98
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -3

Query: 294 DGELIVLGKITDSEQCSRILQQLSNWCSNRCW 199
           DGEL +L  I   ++CS I  Q+++W   + W
Sbjct: 267 DGELDILVPICREDECSHI-TQMASWSKTKLW 297


>AF016673-5|AAB66123.1|  684|Caenorhabditis elegans Hypothetical
           protein T06D4.4 protein.
          Length = 684

 Score = 28.7 bits (61), Expect = 1.3
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = +3

Query: 15  AGLIALVQSSVVSPKTYHFKTKDVDAVFVERQKKVLS---LFQDVDQVNVD 158
           +GL+  +QS ++   +  F  K++DA+  +  K+ L+   +F  +D V  D
Sbjct: 297 SGLVRRIQSGILITNSSSFFGKNLDAIIQQTHKRTLANYLIFHFIDAVTFD 347


>Z35663-8|CAA84728.1|  249|Caenorhabditis elegans Hypothetical
           protein T04A8.9 protein.
          Length = 249

 Score = 27.5 bits (58), Expect = 3.0
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 114 KVLSLFQDVDQVNVDDEYYKIGKDYDVEAN 203
           KVL L Q   Q ++   YYK+ K +  + N
Sbjct: 27  KVLGLAQSASQKDIKSAYYKLSKQHHPDTN 56


>AF099919-4|AAC68791.1|  230|Caenorhabditis elegans Hypothetical
          protein F40G9.12 protein.
          Length = 230

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 11 SSGAHCPRAIQCGVT 55
          +SG HCPR + CG T
Sbjct: 28 TSGDHCPRVLSCGHT 42


>AF016428-7|AAB65361.1|  439|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 19 protein.
          Length = 439

 Score = 26.2 bits (55), Expect = 6.9
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +3

Query: 120 LSLFQDVDQVNVDDEYYKIGKDYDVEANIDY 212
           L++  D  Q ++   Y+K+ K+Y  + N D+
Sbjct: 18  LNVRPDASQADIKKSYFKLAKEYHPDKNPDH 48


>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
            mutant phenotypeprotein 1 protein.
          Length = 4177

 Score = 26.2 bits (55), Expect = 6.9
 Identities = 8/25 (32%), Positives = 18/25 (72%)
 Frame = +3

Query: 123  SLFQDVDQVNVDDEYYKIGKDYDVE 197
            S+  DV ++++DD+Y+ +G  +D +
Sbjct: 2542 SMEDDVQRLDLDDDYFDMGGPFDAQ 2566


>Z98866-13|CAB11552.1|  327|Caenorhabditis elegans Hypothetical
           protein Y49E10.16 protein.
          Length = 327

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 291 GELIVLGKITDSEQCSRILQQLSNWC 214
           G LI+LG  T +++CS  L Q  +WC
Sbjct: 6   GFLIILGLAT-ADKCSDCLAQGKHWC 30


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,682,891
Number of Sequences: 27780
Number of extensions: 137826
Number of successful extensions: 374
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 374
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 492763868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)