Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_H11
(558 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18694| Best HMM Match : SNF7 (HMM E-Value=0.46) 29 1.9
SB_58648| Best HMM Match : Helicase_C (HMM E-Value=2.2e-14) 29 2.6
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 29 2.6
SB_16232| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_29473| Best HMM Match : CASP_C (HMM E-Value=6.5) 29 3.4
SB_12423| Best HMM Match : Glypican (HMM E-Value=1.00053e-42) 29 3.4
SB_56560| Best HMM Match : GBP_C (HMM E-Value=0.065) 28 5.9
SB_8982| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_39193| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.029) 28 5.9
SB_38073| Best HMM Match : ABC_tran (HMM E-Value=1.2e-17) 28 5.9
SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09) 28 5.9
>SB_18694| Best HMM Match : SNF7 (HMM E-Value=0.46)
Length = 238
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 148 LESIEKRKAISSHQDYQHGRLYRRYH*ALLM 240
+ S EKR+++S Q + RL ++YH LLM
Sbjct: 58 IASEEKRRSVSEDQKKELSRLLKKYHKTLLM 88
>SB_58648| Best HMM Match : Helicase_C (HMM E-Value=2.2e-14)
Length = 679
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 148 LESIEKRKAISSHQDYQHGRLYRRYH*ALLM 240
+ S EKR+++S Q + RL ++YH LLM
Sbjct: 498 IASEEKRRSVSEDQKKELSRLLKKYHKKLLM 528
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = -3
Query: 385 IFKSVNIAPESFKTPPSFSPISFKILKYFLLKHEC---GW 275
+++ +IAP+S+ P +F+P++ + Y L+ H GW
Sbjct: 32 VYRRASIAPQSYGAPFAFAPLNPMVSAYPLMGHRVQPYGW 71
>SB_16232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 492
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 148 LESIEKRKAISSHQDYQHGRLYRRYH*ALLM 240
+ S EKR+++S Q + RL ++YH LLM
Sbjct: 311 IASEEKRRSVSEDQKKELSRLLKKYHKKLLM 341
>SB_29473| Best HMM Match : CASP_C (HMM E-Value=6.5)
Length = 389
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 509 SCQSNEIIYSSRGSRVIVPR*FINFRHSCHLHVLFELFVDT 387
S QS + I SR + PR +N CH++ FE V+T
Sbjct: 315 SNQSRDSIVHSRDHSTVTPRDHLNPEPRCHVNSTFEEEVET 355
>SB_12423| Best HMM Match : Glypican (HMM E-Value=1.00053e-42)
Length = 737
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 404 ELFVDTHFQISKYRTGKF*DTAIVFTNFF*NI 309
++FVD +++KY GK D + V NFF N+
Sbjct: 302 QVFVDLFQELNKYYDGKNMDLSQVMNNFFANL 333
>SB_56560| Best HMM Match : GBP_C (HMM E-Value=0.065)
Length = 557
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 277 WSLNTTLISFRVSSVAPNDSADIIVHADSPDVTKWLS 167
W LNT L+SF +S + + S D+ + T+++S
Sbjct: 186 WMLNTDLVSFALSELEFSPSIDLFASRLNKQFTRYVS 222
>SB_8982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 432
Score = 27.9 bits (59), Expect = 5.9
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 7/77 (9%)
Frame = -3
Query: 454 QGNSLTLDTPVICTSCLNCS*TLIFKSVNIAPES---FKTPPSFSPISFKILKYFLL--- 293
+ + LT+ T C+SC C KS+ A S +PP S + +F L
Sbjct: 349 EAHRLTVPTVRNCSSCSTCGRLQTLKSIGGAARSTSFLVSPPGLSHKQLLLSSFFSLDPA 408
Query: 292 -KHECGWSLNTTLISFR 245
K EC L +SF+
Sbjct: 409 IKRECLVYLGWLYVSFK 425
>SB_39193| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.029)
Length = 1769
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 277 WSLNTTLISFRVSSVAPNDSADIIVHADSPDVTKWLS 167
W LNT L+SF +S + + S D+ + T+++S
Sbjct: 346 WMLNTDLVSFALSELEFSPSIDLFASRLNKQFTRYVS 382
>SB_38073| Best HMM Match : ABC_tran (HMM E-Value=1.2e-17)
Length = 398
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/67 (22%), Positives = 34/67 (50%)
Frame = +3
Query: 96 AHTFLKRSLYNFTDELVTRVNRKTESHFVTSGLSAWTIISALSLGATDETLNEINVVLRL 275
A L+R++ DE V+++T+ + S + + L++ T+ +++ V+ L
Sbjct: 280 ARALLRRNVILIIDEATAHVDQRTDVLIQKTIRSKFKDCTVLTIAHRLNTIMDMDRVMLL 339
Query: 276 HPHSCFN 296
+P +C N
Sbjct: 340 NPCTCLN 346
>SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09)
Length = 2059
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -3
Query: 346 TPPSFSPISFKILKYFLLKHECGWSLNTTLISFRVSSVAPND-SADIIVHADSPDVTKW 173
TP F+P+ KIL+Y L+K++ + TL + R S+ ND ++++ D W
Sbjct: 294 TPEHFTPLVGKILRYLLMKNK---GIPQTL-ALRHGSILNNDIGCVLMMNGDCQVARNW 348
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,576,085
Number of Sequences: 59808
Number of extensions: 296241
Number of successful extensions: 806
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1300738331
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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