Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_H09
         (200 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin pro...    64   2e-11
AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin (...    64   2e-11
Z48716-2|CAA88597.2|  169|Caenorhabditis elegans Hypothetical pr...    27   1.4  
Z69787-6|CAA93637.1|  341|Caenorhabditis elegans Hypothetical pr...    27   2.4  
AL132858-11|CAH04763.1|  133|Caenorhabditis elegans Hypothetical...    27   2.4  
AL161712-5|CAC70131.1|  244|Caenorhabditis elegans Hypothetical ...    26   3.2  
AC024776-6|AAK68464.2|   96|Caenorhabditis elegans Hypothetical ...    25   5.6  
AF016427-5|AAB65357.2|  273|Caenorhabditis elegans Ground-like (...    25   7.4  
U56965-6|AAB52669.1|  205|Caenorhabditis elegans Hypothetical pr...    25   9.8  

>L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin
           protein.
          Length = 264

 Score = 63.7 bits (148), Expect = 2e-11
 Identities = 28/60 (46%), Positives = 38/60 (63%)
 Frame = +3

Query: 9   CRGAQYHHVQIEYYGTCREMPECSENEMSDFPRRMRDWLFNIMRDLAERRELTPHYLRME 188
           C  A    V +EY G C+++ EC+E  M+ FP RM DWLF +M++L +RREL  H L  E
Sbjct: 119 CSKAFNAKVHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMKELKKRREL--HKLEWE 176


>AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin
           (sparc) related protein1 protein.
          Length = 264

 Score = 63.7 bits (148), Expect = 2e-11
 Identities = 28/60 (46%), Positives = 38/60 (63%)
 Frame = +3

Query: 9   CRGAQYHHVQIEYYGTCREMPECSENEMSDFPRRMRDWLFNIMRDLAERRELTPHYLRME 188
           C  A    V +EY G C+++ EC+E  M+ FP RM DWLF +M++L +RREL  H L  E
Sbjct: 119 CSKAFNAKVHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMKELKKRREL--HKLEWE 176


>Z48716-2|CAA88597.2|  169|Caenorhabditis elegans Hypothetical
           protein F59B10.3 protein.
          Length = 169

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 120 WLFNIMRDLAERRELTPHY 176
           WLFN  +D  ++REL  HY
Sbjct: 115 WLFNRSKDKQQKRELYEHY 133


>Z69787-6|CAA93637.1|  341|Caenorhabditis elegans Hypothetical
           protein C44C10.7 protein.
          Length = 341

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 117 RACAAGSLTFRSRCTPAFPCK 55
           R C AG++ F SR TP  P K
Sbjct: 179 RDCHAGNILFASRLTPTAPVK 199


>AL132858-11|CAH04763.1|  133|Caenorhabditis elegans Hypothetical
           protein Y113G7A.12 protein.
          Length = 133

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = +2

Query: 38  DRVLRDLQGNAGVQRERNVRLPAAHARLAVQHN 136
           + V+ DLQ +  VQ+ RNVR  ++ +R +V H+
Sbjct: 81  ESVMHDLQSS--VQQSRNVRASSSSSRESVMHD 111


>AL161712-5|CAC70131.1|  244|Caenorhabditis elegans Hypothetical
           protein Y66D12A.8 protein.
          Length = 244

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 45  YYGTCREMPECSENEMSDFPRRMRD 119
           YY TC EM   S+  ++  P+R RD
Sbjct: 44  YYCTCGEMAMISDTLINRMPKRERD 68


>AC024776-6|AAK68464.2|   96|Caenorhabditis elegans Hypothetical
           protein Y41D4B.14 protein.
          Length = 96

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = +3

Query: 24  YHHVQIEYYGTCREMPECSENEMSDFPRRMRDWLF-NIMRDLAERRELTP 170
           YHH QI +        +CSEN  +     +R  +F +I   + E +   P
Sbjct: 7   YHHHQISHQQQQENQQKCSENGGNSSENVLRQLIFVSIENKMEEEKSGVP 56


>AF016427-5|AAB65357.2|  273|Caenorhabditis elegans Ground-like (grd
           related) protein13 protein.
          Length = 273

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = -3

Query: 111 CAAGSLTFRSRCTPAFPCKSRSTRSARGGTAP 16
           CAA SL  RS C P+ PC  R  +S    T P
Sbjct: 35  CAAASLPVRSYCPPS-PC-GRQFQSFPSYTQP 64


>U56965-6|AAB52669.1|  205|Caenorhabditis elegans Hypothetical
           protein C15H9.10 protein.
          Length = 205

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = +3

Query: 33  VQIEYYGTCREMPECSENEMSDFPRRMRDWLFNIMRDLAERRE 161
           +Q   Y T R +PE  E      P  +++W    ++   E R+
Sbjct: 46  LQCVQYFTLRGIPELMEYVAEAIPNELQNWKLTDIKSKTEMRD 88


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.315    0.122    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,147,911
Number of Sequences: 27780
Number of extensions: 64504
Number of successful extensions: 187
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 12,740,198
effective HSP length: 46
effective length of database: 11,462,318
effective search space used: 229246360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)