Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_H08
(633 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 260 6e-70
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 260 6e-70
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 260 6e-70
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 82 3e-16
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 39 0.003
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 31 0.52
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 31 0.52
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 31 0.52
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 31 0.91
U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81476-10|CAN86579.1| 224|Caenorhabditis elegans Hypothetical p... 29 2.1
Z81476-1|CAB03921.2| 431|Caenorhabditis elegans Hypothetical pr... 29 2.1
AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical ... 29 2.1
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 29 2.8
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 29 2.8
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 29 2.8
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 29 2.8
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 29 2.8
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 29 2.8
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 29 2.8
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 29 2.8
Z81097-12|CAD56590.1| 457|Caenorhabditis elegans Hypothetical p... 28 4.8
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 28 4.8
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 4.8
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 4.8
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 4.8
Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical p... 28 6.4
U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription f... 28 6.4
U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein ( Caeno... 28 6.4
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 260 bits (637), Expect = 6e-70
Identities = 120/153 (78%), Positives = 134/153 (87%)
Frame = +1
Query: 1 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN 180
VKSVEMHHE+L EAVPGDNVGFNVKNVSVK++RRG V DSK +P + A F AQVI++N
Sbjct: 255 VKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMN 314
Query: 181 HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSK 360
HPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGDA IV L+P+K
Sbjct: 315 HPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTK 374
Query: 361 PLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 459
PLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 375 PLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSV 407
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 260 bits (637), Expect = 6e-70
Identities = 120/153 (78%), Positives = 134/153 (87%)
Frame = +1
Query: 1 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN 180
VKSVEMHHE+L EAVPGDNVGFNVKNVSVK++RRG V DSK +P + A F AQVI++N
Sbjct: 289 VKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMN 348
Query: 181 HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSK 360
HPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGDA IV L+P+K
Sbjct: 349 HPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTK 408
Query: 361 PLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 459
PLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 409 PLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSV 441
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 260 bits (637), Expect = 6e-70
Identities = 120/153 (78%), Positives = 134/153 (87%)
Frame = +1
Query: 1 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN 180
VKSVEMHHE+L EAVPGDNVGFNVKNVSVK++RRG V DSK +P + A F AQVI++N
Sbjct: 289 VKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMN 348
Query: 181 HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSK 360
HPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGDA IV L+P+K
Sbjct: 349 HPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTK 408
Query: 361 PLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 459
PLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 409 PLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSV 441
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 82.2 bits (194), Expect = 3e-16
Identities = 46/143 (32%), Positives = 78/143 (54%), Gaps = 1/143 (0%)
Frame = +1
Query: 34 QEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTP 213
+ V GDN+ F +K + EL+ G++ + G F A+V+VL H I++GY+
Sbjct: 392 ERVVAGDNIKFKLKGIEENELQGGFIICSPDSLAKTGRV-FDAEVLVLEHRSIIASGYSC 450
Query: 214 VLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFP 393
VL +A + +D++TG+ + K +K + I+ L +P +E F+E+P
Sbjct: 451 VLHIQSAVEEVTVKGVIATIDKKTGE--KKRAKFVKQDEKCIMRLESPEPFVLEPFKEYP 508
Query: 394 PLGRFAVRDMRQTVAVG-VIKAV 459
LGRF +RD +T+A+G V+K V
Sbjct: 509 YLGRFTLRDEGKTIAIGKVLKVV 531
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/102 (22%), Positives = 45/102 (44%)
Frame = +1
Query: 154 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 333
F +++ I G L H+ + C F + +++ G+ + P+ I G +
Sbjct: 487 FEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGAS 546
Query: 334 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 459
A+V + + +E+F LGR R T+A G+++ V
Sbjct: 547 AVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 588
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/102 (22%), Positives = 45/102 (44%)
Frame = +1
Query: 154 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 333
F +++ I G L H+ + C F + +++ G+ + P+ I G +
Sbjct: 505 FEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGAS 564
Query: 334 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 459
A+V + + +E+F LGR R T+A G+++ V
Sbjct: 565 AVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 606
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/96 (26%), Positives = 43/96 (44%)
Frame = +1
Query: 1 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN 180
+KS+ + G + F +K + K++R+G V D K P F A+++VL+
Sbjct: 420 IKSIHRKRMPVGIVKCGQSASFALKKIPKKDVRKGMVLVDPKVKPVASMV-FEAEILVLH 478
Query: 181 HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTG 288
HP I Y +L + + ++V RTG
Sbjct: 479 HPTTIKPNYQAMLHIGSVRQTATLVSMGKEV-LRTG 513
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 31.5 bits (68), Expect = 0.52
Identities = 35/153 (22%), Positives = 64/153 (41%)
Frame = +1
Query: 1 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN 180
+ +E + + +A PGD +G ++ + K++RRG V + + + AQ+ VL
Sbjct: 300 ISGLESFRKTVDQAEPGDQLGVLLRGLGPKDVRRGCVL-LPQGHKHKVTDKVKAQLYVLK 358
Query: 181 HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSK 360
TP+ + + H+ + V R GK + G++A V L +
Sbjct: 359 E--SEGGAKTPIANYFSEHVFSLTWDSGASV-RIIGKD------FVMPGESAEVELSLNS 409
Query: 361 PLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 459
+ +E P RF +R +T+ GV V
Sbjct: 410 QMFIE------PQQRFTIRKGAKTIGTGVFTDV 436
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 31.5 bits (68), Expect = 0.52
Identities = 35/153 (22%), Positives = 64/153 (41%)
Frame = +1
Query: 1 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN 180
+ +E + + +A PGD +G ++ + K++RRG V + + + AQ+ VL
Sbjct: 301 ISGLESFRKTVDQAEPGDQLGVLLRGLGPKDVRRGCVL-LPQGHKHKVTDKVKAQLYVLK 359
Query: 181 HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSK 360
TP+ + + H+ + V R GK + G++A V L +
Sbjct: 360 E--SEGGAKTPIANYFSEHVFSLTWDSGASV-RIIGKD------FVMPGESAEVELSLNS 410
Query: 361 PLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 459
+ +E P RF +R +T+ GV V
Sbjct: 411 QMFIE------PQQRFTIRKGAKTIGTGVFTDV 437
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 31.5 bits (68), Expect = 0.52
Identities = 35/153 (22%), Positives = 64/153 (41%)
Frame = +1
Query: 1 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN 180
+ +E + + +A PGD +G ++ + K++RRG V + + + AQ+ VL
Sbjct: 301 ISGLESFRKTVDQAEPGDQLGVLLRGLGPKDVRRGCVL-LPQGHKHKVTDKVKAQLYVLK 359
Query: 181 HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSK 360
TP+ + + H+ + V R GK + G++A V L +
Sbjct: 360 E--SEGGAKTPIANYFSEHVFSLTWDSGASV-RIIGKD------FVMPGESAEVELSLNS 410
Query: 361 PLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 459
+ +E P RF +R +T+ GV V
Sbjct: 411 QMFIE------PQQRFTIRKGAKTIGTGVFTDV 437
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 30.7 bits (66), Expect = 0.91
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 471 SRWWQSHQSCRKSHQGQEVASTVXSSVLYTTAILHSPKGVQKERRATN 614
SR+ H S S G EV S SS+ +T L+S K ++ RRA N
Sbjct: 3717 SRFLNMHNSGSDSDSGSEVRSDSSSSLGGSTESLNSSKKGKRARRAMN 3764
>U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical
protein C10G11.6 protein.
Length = 425
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 219 GLPHSPHSLQICRNQRESRPSYW*INR 299
GL HSPHS N R S P ++ INR
Sbjct: 47 GLVHSPHSSFTTENLRSSDPMFFDINR 73
>Z81476-10|CAN86579.1| 224|Caenorhabditis elegans Hypothetical
protein C25F9.13 protein.
Length = 224
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 278 VVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSHP 397
++L++ T L L + P + W PPS C P+ ++ P
Sbjct: 149 LILISSLITCFLNLKLSIVPSTKWRPPSSCTMYPANSTFP 188
>Z81476-1|CAB03921.2| 431|Caenorhabditis elegans Hypothetical
protein C25F9.1 protein.
Length = 431
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 278 VVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSHP 397
++L++ T L L + P + W PPS C P+ ++ P
Sbjct: 149 LILISSLITCFFNLKLEIVPSTKWRPPSSCTMYPANSTFP 188
>AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical
protein Y71D11A.1 protein.
Length = 506
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 251 LPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWS 376
LPK+ T V + TT+ P +PP +T PP +S
Sbjct: 264 LPKTTVAPTTTTVPRTTTTVPPTTTTVPPTTTTVPPITTTYS 305
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 453 GCELQGSRWWQSHQSCRKSHQGQEVASTVXSSVLY-TTAILHSPKGVQKERRATNSFLFY 629
GCE++ ++ H +CR S + SS +Y L +P +K+R T+ L Y
Sbjct: 493 GCEIESRNFFPDHANCRHSCAHKYATPASFSSKVYIPPGELSTPVPPRKDRLTTSLKLTY 552
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 453 GCELQGSRWWQSHQSCRKSHQGQEVASTVXSSVLY-TTAILHSPKGVQKERRATNSFLFY 629
GCE++ ++ H +CR S + SS +Y L +P +K+R T+ L Y
Sbjct: 707 GCEIESRNFFPDHANCRHSCAHKYATPASFSSKVYIPPGELSTPVPPRKDRLTTSLKLTY 766
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 453 GCELQGSRWWQSHQSCRKSHQGQEVASTVXSSVLY-TTAILHSPKGVQKERRATNSFLFY 629
GCE++ ++ H +CR S + SS +Y L +P +K+R T+ L Y
Sbjct: 843 GCEIESRNFFPDHANCRHSCAHKYATPASFSSKVYIPPGELSTPVPPRKDRLTTSLKLTY 902
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 453 GCELQGSRWWQSHQSCRKSHQGQEVASTVXSSVLY-TTAILHSPKGVQKERRATNSFLFY 629
GCE++ ++ H +CR S + SS +Y L +P +K+R T+ L Y
Sbjct: 892 GCEIESRNFFPDHANCRHSCAHKYATPASFSSKVYIPPGELSTPVPPRKDRLTTSLKLTY 951
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 453 GCELQGSRWWQSHQSCRKSHQGQEVASTVXSSVLY-TTAILHSPKGVQKERRATNSFLFY 629
GCE++ ++ H +CR S + SS +Y L +P +K+R T+ L Y
Sbjct: 892 GCEIESRNFFPDHANCRHSCAHKYATPASFSSKVYIPPGELSTPVPPRKDRLTTSLKLTY 951
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 453 GCELQGSRWWQSHQSCRKSHQGQEVASTVXSSVLY-TTAILHSPKGVQKERRATNSFLFY 629
GCE++ ++ H +CR S + SS +Y L +P +K+R T+ L Y
Sbjct: 884 GCEIESRNFFPDHANCRHSCAHKYATPASFSSKVYIPPGELSTPVPPRKDRLTTSLKLTY 943
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 453 GCELQGSRWWQSHQSCRKSHQGQEVASTVXSSVLY-TTAILHSPKGVQKERRATNSFLFY 629
GCE++ ++ H +CR S + SS +Y L +P +K+R T+ L Y
Sbjct: 895 GCEIESRNFFPDHANCRHSCAHKYATPASFSSKVYIPPGELSTPVPPRKDRLTTSLKLTY 954
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 453 GCELQGSRWWQSHQSCRKSHQGQEVASTVXSSVLY-TTAILHSPKGVQKERRATNSFLFY 629
GCE++ ++ H +CR S + SS +Y L +P +K+R T+ L Y
Sbjct: 896 GCEIESRNFFPDHANCRHSCAHKYATPASFSSKVYIPPGELSTPVPPRKDRLTTSLKLTY 955
>Z81097-12|CAD56590.1| 457|Caenorhabditis elegans Hypothetical
protein K07A1.9b protein.
Length = 457
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 427 ASCHARRNDRGVGIPGRTPHTGAW 356
+SC +NDRG P R+ +GAW
Sbjct: 15 SSCGYCKNDRGERTPARSAKSGAW 38
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +1
Query: 1 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN 180
V S+ +A+ PG+ ++ LRRG V + + PP +FTA +++L
Sbjct: 450 VGSIRRSRQAVGCVNPGEAASISLNLPDGVSLRRGMVLAEIDHQPP-VCYEFTANLLLLC 508
Query: 181 H 183
H
Sbjct: 509 H 509
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 217 LDCHTAHIACKFAEIKEKVDRRTGKSTE 300
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 217 LDCHTAHIACKFAEIKEKVDRRTGKSTE 300
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 217 LDCHTAHIACKFAEIKEKVDRRTGKSTE 300
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 119 SPAT*PRRNSLTDTFLTLKPTLSPGTASCRAS 24
+P+T P S TD L LKPT +P T S S
Sbjct: 105 APSTAPAPTSTTDV-LELKPTTAPATNSAETS 135
>Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 119 SPAT*PRRNSLTDTFLTLKPTLSPGTASCRAS 24
+P+T P S TD L LKPT +P T S S
Sbjct: 105 APSTAPAPTSTTDV-LELKPTTAPATNSAETS 135
>U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription
factor E12/47 homolog protein.
Length = 399
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 119 SPAT*PRRNSLTDTFLTLKPTLSPGTASCRAS 24
+P+T P S TD L LKPT +P T S S
Sbjct: 105 APSTAPAPTSTTDV-LELKPTTAPATNSAETS 135
>U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein (
Caenorhabditis elegansN2 basic-helix-loop-helix
transcription factor E12/47homolog mRNA, complete cds.
).
Length = 399
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 119 SPAT*PRRNSLTDTFLTLKPTLSPGTASCRAS 24
+P+T P S TD L LKPT +P T S S
Sbjct: 105 APSTAPAPTSTTDV-LELKPTTAPATNSAETS 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,006,330
Number of Sequences: 27780
Number of extensions: 373327
Number of successful extensions: 1191
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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