Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_H07
         (87 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    21   6.8  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    20   8.9  

>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 29  QYVYYANYSNTFLYN 73
           QY Y  NYSN   +N
Sbjct: 140 QYYYMQNYSNYSQHN 154


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 19  RGRAVCVLRQLFQHFPLQ 72
           RG +V VLR+LF+   ++
Sbjct: 85  RGDSVTVLRRLFEELNIK 102


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,606
Number of Sequences: 2352
Number of extensions: 774
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 563,979
effective HSP length: 10
effective length of database: 540,459
effective search space used:  9728262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)