BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_H07
(87 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 1.8
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 1.8
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 1.8
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 1.8
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 1.8
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 1.8
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 1.8
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 1.8
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 1.8
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 20 3.1
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 20 3.1
S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor prot... 19 4.1
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 19 4.1
S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor prot... 19 7.2
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 19 7.2
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 19 7.2
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 18 9.5
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 18 9.5
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 18 9.5
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 18 9.5
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 18 9.5
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 18 9.5
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 18 9.5
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 18 9.5
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 32 YVYYANYSNTFLYNN 76
Y Y NY+N YNN
Sbjct: 91 YSNYNNYNNNNNYNN 105
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 32 YVYYANYSNTFLYNN 76
Y Y NY+N YNN
Sbjct: 91 YSNYNNYNNNNNYNN 105
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 32 YVYYANYSNTFLYNN 76
Y Y NY+N YNN
Sbjct: 91 YSNYNNYNNNNNYNN 105
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 32 YVYYANYSNTFLYNN 76
Y Y NY+N YNN
Sbjct: 91 YSNYNNYNNNNNYNN 105
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 32 YVYYANYSNTFLYNN 76
Y Y NY+N YNN
Sbjct: 91 YSNYNNYNNNNNYNN 105
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 32 YVYYANYSNTFLYNN 76
Y Y NY+N YNN
Sbjct: 91 YSNYNNYNNNNNYNN 105
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 32 YVYYANYSNTFLYNN 76
Y Y NY+N YNN
Sbjct: 91 YSNYNNYNNNNNYNN 105
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 32 YVYYANYSNTFLYNN 76
Y Y NY+N YNN
Sbjct: 91 YSNYNNYNNNNNYNN 105
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.6 bits (41), Expect = 1.8
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 38 YYANYSNTFLYNN 76
Y NY+N + YNN
Sbjct: 96 YKYNYNNKYNYNN 108
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 19.8 bits (39), Expect = 3.1
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 41 YANYSNTFLYNN 76
Y+NY+N YNN
Sbjct: 324 YSNYNNYNNYNN 335
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3
Query: 58 VGIVGVIHILLFLFYN 11
+GIV HIL F+ N
Sbjct: 480 IGIVNQFHILQFITKN 495
>S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor
protein.
Length = 168
Score = 19.4 bits (38), Expect = 4.1
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -3
Query: 85 LFFIIVKESVGIVGVIHILLFLFYNSII 2
LFFI V+ S ++ ++ +FY ++I
Sbjct: 133 LFFIYVQPSATFSLDLNKVVSVFYTAVI 160
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 19.4 bits (38), Expect = 4.1
Identities = 5/14 (35%), Positives = 12/14 (85%)
Frame = -3
Query: 43 VIHILLFLFYNSII 2
+I+ +FL++NS++
Sbjct: 18 LINYFIFLYFNSLV 31
>S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor
protein.
Length = 169
Score = 18.6 bits (36), Expect = 7.2
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 85 LFFIIVKESVGIVGVIHILLFLFYNSII 2
LFFI V S ++ ++ +FY ++I
Sbjct: 134 LFFIYVHPSATFSLDLNKVVSVFYTAVI 161
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 18.6 bits (36), Expect = 7.2
Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
Frame = +2
Query: 26 EQYVYYANYSNTFL---YNNEEQ 85
++Y+ ANYS +L YN E +
Sbjct: 197 KEYIIPANYSGWYLNHDYNLENK 219
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 18.6 bits (36), Expect = 7.2
Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
Frame = +2
Query: 26 EQYVYYANYSNTFL---YNNEEQ 85
++Y+ ANYS +L YN E +
Sbjct: 197 KEYIIPANYSGWYLNHDYNLENK 219
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 18.2 bits (35), Expect = 9.5
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +2
Query: 50 YSNTFLYNNEEQ 85
Y +T+L+ EEQ
Sbjct: 434 YWSTYLFREEEQ 445
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 18.2 bits (35), Expect = 9.5
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +2
Query: 50 YSNTFLYNNEEQ 85
Y +T+L+ EEQ
Sbjct: 434 YWSTYLFREEEQ 445
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 18.2 bits (35), Expect = 9.5
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = +2
Query: 38 YYANYSNTFLYNNEEQ 85
++AN N+FL++ E+
Sbjct: 122 FFANDKNSFLHDVTER 137
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 18.2 bits (35), Expect = 9.5
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +2
Query: 29 QYVYYANYSNTFLYNN 76
+Y Y NY+N NN
Sbjct: 90 KYSNYNNYNNNNYNNN 105
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 18.2 bits (35), Expect = 9.5
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +2
Query: 29 QYVYYANYSNTFLYNN 76
+Y Y NY+N NN
Sbjct: 90 KYSNYNNYNNNNYNNN 105
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 18.2 bits (35), Expect = 9.5
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +2
Query: 29 QYVYYANYSNTFLYNN 76
+Y Y NY+N NN
Sbjct: 90 KYSNYNNYNNNNYNNN 105
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 18.2 bits (35), Expect = 9.5
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +2
Query: 29 QYVYYANYSNTFLYNN 76
+Y Y NY+N NN
Sbjct: 90 KYSNYNNYNNNNYNNN 105
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 18.2 bits (35), Expect = 9.5
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +2
Query: 47 NYSNTFLYNN 76
NYSN + NN
Sbjct: 312 NYSNNYYNNN 321
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,048
Number of Sequences: 438
Number of extensions: 416
Number of successful extensions: 24
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 10
effective length of database: 141,963
effective search space used: 2555334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
- SilkBase 1999-2023 -