Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_H06
(534 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 91 5e-19
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 2e-16
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 79 3e-15
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 69 3e-12
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 69 3e-12
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30) 63 1e-10
SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18) 57 8e-09
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15) 52 2e-07
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 39 0.003
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 38 0.005
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 36 0.021
SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24) 35 0.048
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017) 34 0.063
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39) 32 0.26
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_34490| Best HMM Match : CUB (HMM E-Value=1.3e-07) 31 0.78
SB_56714| Best HMM Match : 7tm_3 (HMM E-Value=1.6e-18) 30 1.4
SB_48646| Best HMM Match : Sulfotransfer_1 (HMM E-Value=8.5) 30 1.4
SB_9360| Best HMM Match : CUB (HMM E-Value=2.5e-35) 30 1.4
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_59414| Best HMM Match : Complex1_LYR (HMM E-Value=7.7) 29 3.2
SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_19343| Best HMM Match : tRNA-synt_1e (HMM E-Value=0) 29 3.2
SB_9322| Best HMM Match : RGS (HMM E-Value=0.037) 28 5.5
SB_3750| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_49983| Best HMM Match : Cyt-b5 (HMM E-Value=8.4e-12) 27 7.3
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 91.1 bits (216), Expect = 5e-19
Identities = 47/117 (40%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Frame = +1
Query: 172 PDGSLNLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGT 351
PD S N W+ AI G GT + GG +K M F DYP SPP +F ++HPN+Y SG
Sbjct: 1149 PDES-NTFEWDVAIFGPPGTLYAGGYFKAHMSFPHDYPYSPPTFRFLTKMWHPNIYESGD 1207
Query: 352 VCLSLLDEEKD-----------WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIY 489
VC+S+L D W P ++ ILL + LLNEPN PA +A ++
Sbjct: 1208 VCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMF 1264
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 82.2 bits (194), Expect = 2e-16
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 11/108 (10%)
Frame = +1
Query: 187 NLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 366
+L WE + G GT +E G +K M+F +YP PP F ++HPNV+ +G VC+S+
Sbjct: 361 DLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFISDIWHPNVHKNGEVCISI 420
Query: 367 LDE-----------EKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEA 477
L E ++ WRP T++ I+L + +L EPN + PA +A
Sbjct: 421 LHEPGEDKYGYEKADERWRPIHTVETIMLSVISMLAEPNDESPANVDA 468
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 78.6 bits (185), Expect = 3e-15
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Frame = +1
Query: 217 GKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLL--DEEKDWR 390
G +GT + G++KL + + YP PPK +F P++HPN+ SG +CL L + W+
Sbjct: 4 GAEGTPYHKGIFKLDIQIPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWK 63
Query: 391 PAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDKRVR 525
PA+ I +L I L+ EPN DP AE + N+ ++ ++ +
Sbjct: 64 PALNISSVLSTILILMAEPNPDDPLMAEISNEFKYNKAQFLEKAK 108
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 68.5 bits (160), Expect = 3e-12
Identities = 42/114 (36%), Positives = 56/114 (49%)
Frame = +1
Query: 172 PDGSLNLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGT 351
P G +L W I G G+ +EGG++ L + F DYP PPK G
Sbjct: 119 PKGD-DLYEWYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPPK---------------GM 162
Query: 352 VCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYD 513
VCL +L + W PA+TI ++LL I LL + N DP +Y QNR E+D
Sbjct: 163 VCLDILKDS--WSPALTISKVLLSICSLLTDCNPADPLVGSIAALYVQNRSEHD 214
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 68.5 bits (160), Expect = 3e-12
Identities = 29/110 (26%), Positives = 62/110 (56%)
Frame = +1
Query: 187 NLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 366
N++ W+ I + + G +++ + F +YP PPK F+ ++HPN+ G VCL +
Sbjct: 22 NILYWQGLIVPEM-PPYNKGAFRIEICFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPI 80
Query: 367 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 516
+ E +W+PA +Q++ + L+++P + P +A+ Y +++ ++ K
Sbjct: 81 ISPE-NWKPATKTEQVIQALLALVHDPEPEHPLRADLAEEYSKDKKKFMK 129
>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
Length = 204
Score = 63.3 bits (147), Expect = 1e-10
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Frame = +1
Query: 283 PSSPPKCKFEPPLFHPNVYPSGTVCLSLL--DEEKDWRPAITIKQILLGIQDLLNEPNVK 456
P PPK +F P++HPN+ SG +CL L + W+PA+ I +L I L+ EPN
Sbjct: 40 PFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWKPALNISSVLSTILILMAEPNPD 99
Query: 457 DPAQAEAYTIYCQNRLEYDKRVR 525
DP AE + N+ ++ ++ +
Sbjct: 100 DPLMAEISNEFKYNKAQFLEKAK 122
>SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)
Length = 215
Score = 57.2 bits (132), Expect = 8e-09
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Frame = +1
Query: 187 NLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 363
N+ +E I G A+ GG +K + +DYP++PP + ++HPN+ G+VCLS
Sbjct: 35 NMEEFELQITPTDG-AYRGGQFKFS-VKTEDYPNTPPVPRCVNNIYHPNMDLDDGSVCLS 92
Query: 364 LLDEEKDWRPAITIKQILLGIQDLLNEPNVKDP 462
LLD DW + ++ ++ G+ L PN++DP
Sbjct: 93 LLD---DWNESNDLEDLVQGLLFLFYNPNLEDP 122
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/73 (36%), Positives = 43/73 (58%)
Frame = +1
Query: 307 FEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTI 486
F +FHPNV +G +C++ L +KDW+P + IKQ+LL ++ LL PN + EA +
Sbjct: 147 FLTKIFHPNVAKNGEICVNTL--KKDWKPDLGIKQVLLTVKCLLIVPNPESALNEEAGKL 204
Query: 487 YCQNRLEYDKRVR 525
+ +Y KR +
Sbjct: 205 LLERYDDYSKRAK 217
>SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)
Length = 243
Score = 52.4 bits (120), Expect = 2e-07
Identities = 29/92 (31%), Positives = 49/92 (53%)
Frame = +1
Query: 187 NLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 366
N+ +E I G A+ GG +K + DYP+ P + ++HPN+ VC+SL
Sbjct: 35 NMEEFELQITPTDG-AYRGGQFKFS-VRTTDYPNVAPSINCKTKIYHPNMDGYDGVCMSL 92
Query: 367 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDP 462
LD DW+ + ++ ++ G+ L PN++DP
Sbjct: 93 LD---DWQASNDLEDLVQGLLFLFYNPNLEDP 121
>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 44.0 bits (99), Expect = 8e-05
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Frame = +1
Query: 211 IPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPP-----LFHPNVYPSGTVCLSLLDE 375
I G T +EGG + + DYP PP+ K F+PN+Y +G VCLS++ +
Sbjct: 17 ITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMTTGSGQVRFNPNLYRNGKVCLSIIGD 76
Query: 376 --EKDWRPAITIKQILLGIQDLLNEPNVKDP 462
EK + ++ + LN N++DP
Sbjct: 77 VMEKSFPEFYDYYISVITEKSYLNGQNMQDP 107
>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Frame = +1
Query: 91 ASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMIF 270
A RL E K R + A+P+++ NL W + G T + GG Y R+I
Sbjct: 11 AVKRLMREAKELRNATEL-YHAQPLED-----NLFEWHFTVRGPPDTEFAGGRYHGRIIL 64
Query: 271 KDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL-LDEEKDWRPAITIKQILLGI 426
+YP PP P + +CLS+ + W+P+ +I+ +L+ I
Sbjct: 65 PPEYPMKPPSIMLLTP--NGRFEIGKKICLSMSAHHPETWQPSWSIRTVLMAI 115
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +1
Query: 172 PDGSLNLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPK 300
P G +L W I G G+ +EGG++ L + F DYP PPK
Sbjct: 159 PKGD-DLYEWYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPPK 200
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 37.9 bits (84), Expect = 0.005
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +1
Query: 172 PDGSLNLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPK 300
P G L W I G G+ +EGG++ L + F DYP PPK
Sbjct: 46 PKGD-KLYEWYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPPK 87
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 35.9 bits (79), Expect = 0.021
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +1
Query: 211 IPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPL---FHPNVYPSGTVCLS 363
I G GT ++ GL+ ++ +YP +PP + +PN+Y G VC++
Sbjct: 640 IEGPAGTPYDHGLFAFDILLPANYPDAPPSFHYLSMCNGRLNPNLYEDGKVCIT 693
>SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24)
Length = 48
Score = 34.7 bits (76), Expect = 0.048
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 385 WRPAITIKQILLGIQDLLNEPNVKDP 462
W PA+ I+ +LL IQ LL+ PN DP
Sbjct: 3 WSPALQIRTVLLSIQALLSAPNPDDP 28
>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
Length = 123
Score = 34.3 bits (75), Expect = 0.063
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 187 NLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPP 297
NL W + G T + GG Y R+I +YP PP
Sbjct: 2 NLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPP 38
>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
Length = 841
Score = 32.3 bits (70), Expect = 0.26
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 211 IPGKKGTAWEGGLYKLRMIFKDDYPSSPPK 300
I G T +EGG Y L ++ + YP +PPK
Sbjct: 693 IRGPPETPFEGGTYNLDIVIPETYPFNPPK 722
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 31.9 bits (69), Expect = 0.34
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 256 LRMIFKDDYPSSPPKCKFEPPLFHPN-VYPSGTVCLSLLDEEKDWRPAITIKQILL 420
L + F +++P +PP + P V G +C+ LL K W A T++ ++L
Sbjct: 793 LNITFPENFPFAPPFMRVLAPRIEGGFVLDGGAICMELL-TPKGWSSAYTVEAVVL 847
>SB_34490| Best HMM Match : CUB (HMM E-Value=1.3e-07)
Length = 242
Score = 30.7 bits (66), Expect = 0.78
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 325 HPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIY 489
+PN YP+ C + + + ITI L + D L+ NVK AE Y
Sbjct: 159 YPNSYPNNMDCRWTIIVQAGFIVRITIAVFELAVNDFLHTSNVKSAQAAEGNKTY 213
>SB_56714| Best HMM Match : 7tm_3 (HMM E-Value=1.6e-18)
Length = 484
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 295 PKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 438
P C P +PNV + TVC+ L E DW ++ + L I +L
Sbjct: 165 PNCTMCPIKQYPNV--NRTVCIDLPLENLDWTSLVSASMLALAITAML 210
>SB_48646| Best HMM Match : Sulfotransfer_1 (HMM E-Value=8.5)
Length = 674
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 232 AWEGGLYKLRMIFKD-DYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAI 399
A+EG + ++ + D + P C F +F +P V LS+ D+E+ WR ++
Sbjct: 44 AFEGQMPNFEEMYANVDATTDAPACFFYKEIFR--AFPYAKVILSVRDDEESWRRSL 98
>SB_9360| Best HMM Match : CUB (HMM E-Value=2.5e-35)
Length = 275
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 325 HPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIY 489
+PN YP+ C + + + IT+ L + D L+ NVK AE Y
Sbjct: 192 YPNSYPNNMDCRWTIIVQAGFIVRITVAVFELAVNDFLHMSNVKSTQAAEGNKTY 246
>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 217 GKKGTAWEGGLYKLRMIFKDDYPSSPP 297
G GT +EGG++K+R+ + YP P
Sbjct: 56 GPVGTPYEGGVWKVRVDLPEKYPFKSP 82
>SB_59414| Best HMM Match : Complex1_LYR (HMM E-Value=7.7)
Length = 350
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 232 AWEGGLYKLRMIFKD-DYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWR 390
A++G + ++++ D + P C F +F +P V LS+ D+E+ WR
Sbjct: 44 AFKGPMPNFEEMYENVDATTDLPACIFYKEIF--KAFPDAKVILSVRDDEESWR 95
>SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 28.7 bits (61), Expect = 3.2
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 229 TAWEGGLYKLRMIFKDDYPSSPPKCKF 309
T +E +Y L+++ +YP PP KF
Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKF 27
>SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 28.7 bits (61), Expect = 3.2
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 229 TAWEGGLYKLRMIFKDDYPSSPPKCKF 309
T +E +Y L+++ +YP PP KF
Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKF 27
>SB_19343| Best HMM Match : tRNA-synt_1e (HMM E-Value=0)
Length = 583
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 379 KDWRPAITIKQILLGIQDLLNEPNVKDP 462
K + ITIK L ++D+L +P VK P
Sbjct: 377 KSLKNFITIKDFFLAVKDILRKPEVKAP 404
>SB_9322| Best HMM Match : RGS (HMM E-Value=0.037)
Length = 1068
Score = 27.9 bits (59), Expect = 5.5
Identities = 20/69 (28%), Positives = 29/69 (42%)
Frame = -3
Query: 397 LQDANPSLHLGETDTLFLMGTHWGGKEEVQTCTLGDLKDNHL*RSFLIYKVHLPKQSLFF 218
+ + N L E D + H EE++ TLG L+ L RSFL V + + +
Sbjct: 313 VMEFNDDADLDEADIKSIASRHNITLEELKEHTLGSLRGMSLFRSFLEDTVGIHLYNFWL 372
Query: 217 QVSHIPRSL 191
H SL
Sbjct: 373 DAEHYKDSL 381
>SB_3750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/53 (22%), Positives = 25/53 (47%)
Frame = +1
Query: 88 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGG 246
+ + + A+E + W + +G+ + + SL + E +P K W+GG
Sbjct: 37 VVTHKSAKESRRWLSEPSYGYWPQQLNFAGISLERLCIEFGLPRKPDFRWKGG 89
>SB_49983| Best HMM Match : Cyt-b5 (HMM E-Value=8.4e-12)
Length = 303
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 436 LNEPNVKDPAQAEAYTIYC 492
L++P +DP + AYTIYC
Sbjct: 246 LDDPYSRDPKRHPAYTIYC 264
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,238,195
Number of Sequences: 59808
Number of extensions: 386841
Number of successful extensions: 833
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1203486867
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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