Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_H06
(534 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 230 5e-61
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 121 3e-28
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 121 3e-28
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 120 8e-28
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 118 2e-27
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 105 2e-23
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 103 7e-23
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 101 3e-22
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 101 3e-22
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 101 4e-22
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 100 5e-22
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 100 5e-22
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 100 7e-22
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 100 7e-22
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 99 9e-22
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 99 2e-21
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 98 3e-21
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 98 4e-21
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 98 4e-21
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 96 1e-20
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 93 8e-20
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 89 1e-18
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 88 4e-18
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 87 9e-18
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 86 1e-17
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 80 8e-16
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 79 1e-15
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 79 1e-15
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 79 2e-15
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 79 2e-15
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 79 2e-15
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 79 2e-15
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 77 6e-15
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 76 1e-14
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 75 2e-14
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 74 7e-14
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 74 7e-14
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 69 3e-12
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 68 3e-12
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 67 8e-12
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 66 2e-11
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 64 7e-11
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 59 2e-09
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 55 3e-08
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 54 6e-08
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 54 8e-08
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 53 1e-07
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 53 1e-07
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 53 1e-07
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 47 9e-06
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 46 1e-05
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 44 5e-05
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 44 8e-05
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 43 1e-04
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 39 0.002
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 39 0.002
At1g11780.1 68414.m01352 oxidoreductase, 2OG-Fe(II) oxygenase fa... 35 0.030
At1g33060.2 68414.m04076 no apical meristem (NAM) family protein... 31 0.48
At1g33060.1 68414.m04075 no apical meristem (NAM) family protein... 31 0.48
At3g22470.1 68416.m02840 pentatricopeptide (PPR) repeat-containi... 29 2.6
At3g05230.1 68416.m00571 signal peptidase subunit family protein... 28 3.4
At2g40470.1 68415.m04994 LOB domain protein 15 / lateral organ b... 28 4.5
At5g46030.1 68418.m05661 expressed protein contains Pfam profile... 27 7.9
At2g20250.1 68415.m02366 hypothetical protein 27 7.9
At1g31250.1 68414.m03825 proline-rich family protein contains pr... 27 7.9
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 230 bits (562), Expect = 5e-61
Identities = 98/151 (64%), Positives = 118/151 (78%)
Frame = +1
Query: 82 SGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLR 261
SGIA RLAEERK+WRK+HP GFVA+P DG++NLM W C IPGK GT WEGG + L
Sbjct: 3 SGIARGRLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLT 62
Query: 262 MIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLN 441
M F +DYPS PPKCKF FHPNVYPSGTVCLS+L+E+ WRPAIT+KQIL+GIQDLL+
Sbjct: 63 MHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDYGWRPAITVKQILVGIQDLLD 122
Query: 442 EPNVKDPAQAEAYTIYCQNRLEYDKRVRAQA 534
PN DPAQ + Y ++CQ+ +EY KRV+ Q+
Sbjct: 123 TPNPADPAQTDGYHLFCQDPVEYKKRVKLQS 153
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 121 bits (292), Expect = 3e-28
Identities = 58/149 (38%), Positives = 83/149 (55%)
Frame = +1
Query: 79 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKL 258
MS A RL + K ++D P G P N N+M W I G T W+GG +KL
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKL 55
Query: 259 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 438
+ F +DYP+ PP +F +FHPN+Y G++CL +L + W P + IL IQ LL
Sbjct: 56 SLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAILTSIQSLL 113
Query: 439 NEPNVKDPAQAEAYTIYCQNRLEYDKRVR 525
+PN PA +EA +Y +++ EY++RVR
Sbjct: 114 CDPNPNSPANSEAARMYSESKREYNRRVR 142
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 121 bits (292), Expect = 3e-28
Identities = 58/149 (38%), Positives = 83/149 (55%)
Frame = +1
Query: 79 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKL 258
MS A RL + K ++D P G P N N+M W I G T W+GG +KL
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKL 55
Query: 259 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 438
+ F +DYP+ PP +F +FHPN+Y G++CL +L + W P + IL IQ LL
Sbjct: 56 SLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAILTSIQSLL 113
Query: 439 NEPNVKDPAQAEAYTIYCQNRLEYDKRVR 525
+PN PA +EA +Y +++ EY++RVR
Sbjct: 114 CDPNPNSPANSEAARMYSESKREYNRRVR 142
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 120 bits (288), Expect = 8e-28
Identities = 57/149 (38%), Positives = 83/149 (55%)
Frame = +1
Query: 79 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKL 258
MS A RL + K ++D P G P N N+M W I G T W+GG +KL
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKL 55
Query: 259 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 438
+ F +DYP+ PP +F +FHPN+Y G++CL +L + W P + IL IQ LL
Sbjct: 56 SLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAILTSIQSLL 113
Query: 439 NEPNVKDPAQAEAYTIYCQNRLEYDKRVR 525
+PN PA +EA ++ +++ EY++RVR
Sbjct: 114 CDPNPNSPANSEAARMFSESKREYNRRVR 142
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 118 bits (284), Expect = 2e-27
Identities = 56/148 (37%), Positives = 83/148 (56%)
Frame = +1
Query: 79 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKL 258
M+ A RL + K +KD P G P N N+M W I G + T W+GG +KL
Sbjct: 1 MTTPAKKRLMWDFKRLQKDPPVGISGAPQDN-----NIMHWNALIFGPEDTPWDGGTFKL 55
Query: 259 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 438
+ F +DYP+ PP +F +FHPN+Y G++CL +L + W P + +L IQ LL
Sbjct: 56 TLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAVLTSIQSLL 113
Query: 439 NEPNVKDPAQAEAYTIYCQNRLEYDKRV 522
+PN PA AEA ++ +N+ EY+++V
Sbjct: 114 CDPNPDSPANAEAARLFSENKREYNRKV 141
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 105 bits (251), Expect = 2e-23
Identities = 44/115 (38%), Positives = 71/115 (61%)
Frame = +1
Query: 181 SLNLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCL 360
S N+ W I G GT +EGG++ L + F DYP PPK F+ P++HPN+ G++C+
Sbjct: 33 SNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICM 92
Query: 361 SLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDKRVR 525
++L ++ W PA+ ++++LL I LL +PN DP E ++ NR ++D+R R
Sbjct: 93 NILKDK--WTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAR 145
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 103 bits (247), Expect = 7e-23
Identities = 52/147 (35%), Positives = 81/147 (55%)
Frame = +1
Query: 88 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMI 267
+AS R+ +E K +KD P A P+ ++ W+ I G + + GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSDSPYSGGVFLVTIH 55
Query: 268 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 447
F DYP PPK F +FHPNV +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 448 NVKDPAQAEAYTIYCQNRLEYDKRVRA 528
N DP E +Y +R +Y+ R+
Sbjct: 114 NPDDPLVPEIAHMYKTDRAKYESTARS 140
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 101 bits (242), Expect = 3e-22
Identities = 51/146 (34%), Positives = 80/146 (54%)
Frame = +1
Query: 88 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMI 267
+AS R+ +E K +KD P A P+ ++ W+ I G + + GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPAESPYSGGVFLVTIH 55
Query: 268 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 447
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 448 NVKDPAQAEAYTIYCQNRLEYDKRVR 525
N DP E +Y +R +Y+ R
Sbjct: 114 NPDDPLVPEIAHMYKTDRAKYEATAR 139
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 101 bits (242), Expect = 3e-22
Identities = 51/146 (34%), Positives = 80/146 (54%)
Frame = +1
Query: 88 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMI 267
+AS R+ +E K +KD P A P+ ++ W+ I G + + GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPAESPYSGGVFLVTIH 55
Query: 268 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 447
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 448 NVKDPAQAEAYTIYCQNRLEYDKRVR 525
N DP E +Y +R +Y+ R
Sbjct: 114 NPDDPLVPEIAHMYKTDRAKYEATAR 139
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 101 bits (241), Expect = 4e-22
Identities = 50/147 (34%), Positives = 82/147 (55%)
Frame = +1
Query: 88 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMI 267
+AS R+ +E K +KD P A P+ ++ W+ I G + + GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPSNCSAGPVAE-----DMFHWQATIMGPPESPYAGGVFLVSIH 55
Query: 268 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 447
F DYP PPK F+ ++HPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 448 NVKDPAQAEAYTIYCQNRLEYDKRVRA 528
N DP E +Y +R +Y+ R+
Sbjct: 114 NPDDPLVPEIAHMYKTDRSKYESTARS 140
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 100 bits (240), Expect = 5e-22
Identities = 50/146 (34%), Positives = 80/146 (54%)
Frame = +1
Query: 88 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMI 267
+AS R+ +E K +KD P A P+ ++ W+ I G + + GG++ + +
Sbjct: 31 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSDSPYSGGVFLVTIH 85
Query: 268 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 447
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 86 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 143
Query: 448 NVKDPAQAEAYTIYCQNRLEYDKRVR 525
N DP E +Y ++ +Y+ R
Sbjct: 144 NPDDPLVPEIAHMYKTDKNKYESTAR 169
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 100 bits (240), Expect = 5e-22
Identities = 50/146 (34%), Positives = 80/146 (54%)
Frame = +1
Query: 88 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMI 267
+AS R+ +E K +KD P A P+ ++ W+ I G + + GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSDSPYSGGVFLVTIH 55
Query: 268 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 447
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 448 NVKDPAQAEAYTIYCQNRLEYDKRVR 525
N DP E +Y ++ +Y+ R
Sbjct: 114 NPDDPLVPEIAHMYKTDKNKYESTAR 139
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 100 bits (239), Expect = 7e-22
Identities = 50/147 (34%), Positives = 81/147 (55%)
Frame = +1
Query: 88 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMI 267
+AS R+ +E K +KD P A P+ ++ W+ I G + + GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSESPYAGGVFLVTIH 55
Query: 268 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 447
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 448 NVKDPAQAEAYTIYCQNRLEYDKRVRA 528
N DP E +Y ++ +Y+ R+
Sbjct: 114 NPDDPLVPEIAHMYKTDKNKYESTARS 140
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 100 bits (239), Expect = 7e-22
Identities = 50/147 (34%), Positives = 81/147 (55%)
Frame = +1
Query: 88 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMI 267
+AS R+ +E K +KD P A P+ ++ W+ I G + + GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSESPYAGGVFLVTIH 55
Query: 268 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 447
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 448 NVKDPAQAEAYTIYCQNRLEYDKRVRA 528
N DP E +Y ++ +Y+ R+
Sbjct: 114 NPDDPLVPEIAHMYKTDKNKYESTARS 140
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 99 bits (238), Expect = 9e-22
Identities = 48/112 (42%), Positives = 65/112 (58%)
Frame = +1
Query: 187 NLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 366
N+ W+ I G K T +EG Y+L + F +DYP PPK KFE FHPNV G +CL +
Sbjct: 63 NIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDI 122
Query: 367 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDKRV 522
L ++ W A ++ ILL IQ LL EPN+ P +A ++ N+ EY K V
Sbjct: 123 LQDK--WSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLW-SNQEEYRKMV 171
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 99.1 bits (236), Expect = 2e-21
Identities = 51/147 (34%), Positives = 81/147 (55%), Gaps = 1/147 (0%)
Frame = +1
Query: 88 IASARLAEERKAWRKDHPFGFV-ARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRM 264
+AS R+ +E K +KD P + A P+ ++ W+ I G + + GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCIFAGPVAE-----DMFHWQATIMGPAESPYSGGVFLVTI 55
Query: 265 IFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNE 444
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +
Sbjct: 56 HFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTD 113
Query: 445 PNVKDPAQAEAYTIYCQNRLEYDKRVR 525
PN DP E +Y +R +Y+ R
Sbjct: 114 PNPDDPLVPEIAHMYKTDRAKYEATAR 140
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 98.3 bits (234), Expect = 3e-21
Identities = 49/147 (33%), Positives = 80/147 (54%)
Frame = +1
Query: 88 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMI 267
+A+ R+ +E K ++D P A P G ++ W+ I G + + GG++ + +
Sbjct: 1 MATRRILKELKELQRDPPVSCSA----GPTGE-DMFHWQATIMGPNESPYSGGVFLVNIH 55
Query: 268 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 447
F DYP PPK F +FHPN+ +G +CL +L ++ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQ--WSPALTISKVLLSICSLLTDP 113
Query: 448 NVKDPAQAEAYTIYCQNRLEYDKRVRA 528
N DP E IY ++ +Y+ R+
Sbjct: 114 NPDDPLVPEIAHIYKTDKTKYEAMARS 140
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 97.9 bits (233), Expect = 4e-21
Identities = 47/147 (31%), Positives = 82/147 (55%)
Frame = +1
Query: 88 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMI 267
+AS R+ +E + ++D P A P + ++ W+ I G + + GG++ + +
Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGD-----DMFQWQATIMGPADSPFAGGVFLVTIH 55
Query: 268 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 447
F DYP PPK F ++HPN+ +G++CL +L E+ W PA+T+ ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQ--WSPALTVSKVLLSICSLLTDP 113
Query: 448 NVKDPAQAEAYTIYCQNRLEYDKRVRA 528
N DP E IY +R++Y+ ++
Sbjct: 114 NPDDPLVPEIAHIYKTDRVKYESTAQS 140
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 97.9 bits (233), Expect = 4e-21
Identities = 47/147 (31%), Positives = 82/147 (55%)
Frame = +1
Query: 88 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMI 267
+AS R+ +E + ++D P A P + ++ W+ I G + + GG++ + +
Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGD-----DMFQWQATIMGPADSPFAGGVFLVTIH 55
Query: 268 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 447
F DYP PPK F ++HPN+ +G++CL +L E+ W PA+T+ ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQ--WSPALTVSKVLLSICSLLTDP 113
Query: 448 NVKDPAQAEAYTIYCQNRLEYDKRVRA 528
N DP E IY +R++Y+ ++
Sbjct: 114 NPDDPLVPEIAHIYKTDRVKYESTAQS 140
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 95.9 bits (228), Expect = 1e-20
Identities = 47/112 (41%), Positives = 64/112 (57%)
Frame = +1
Query: 187 NLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 366
N+ W+ I G K T +EG Y+L + F +DYP PK KFE FHPNV G +CL +
Sbjct: 64 NIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDI 123
Query: 367 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDKRV 522
L ++ W A ++ ILL IQ LL EPN+ P +A ++ N+ EY K V
Sbjct: 124 LQDK--WSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLW-SNQEEYRKMV 172
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 93.5 bits (222), Expect = 8e-20
Identities = 45/142 (31%), Positives = 76/142 (53%)
Frame = +1
Query: 88 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMI 267
+AS R++ E + ++ P A P+ D + W+ I G + + GG++ + +
Sbjct: 1 MASKRISRELRDMQRHPPANCSAGPVAEED----IFHWQATIMGPHDSPYSGGVFTVSID 56
Query: 268 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 447
F DYP PPK F+ ++HPN+ G++CL +L E+ W PA T ++LL I LL +P
Sbjct: 57 FSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQ--WSPAPTTSKVLLSICSLLTDP 114
Query: 448 NVKDPAQAEAYTIYCQNRLEYD 513
N DP E +Y ++ +Y+
Sbjct: 115 NPNDPLVPEIAHLYKVDKSKYE 136
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 89.4 bits (212), Expect = 1e-18
Identities = 45/123 (36%), Positives = 65/123 (52%), Gaps = 11/123 (8%)
Frame = +1
Query: 187 NLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 366
N+ W I G T +EGG + M F +YP+SPP +F ++HPNVYP G VC+S+
Sbjct: 33 NIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISI 92
Query: 367 LDEEKD-----------WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYD 513
L D W P T++ I+L I +L+ PN + PA EA + + R E+
Sbjct: 93 LHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEFK 152
Query: 514 KRV 522
K+V
Sbjct: 153 KKV 155
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 87.8 bits (208), Expect = 4e-18
Identities = 45/123 (36%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Frame = +1
Query: 187 NLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 366
N+ W +I G T +EGG + M F ++YP SPP F ++HPNVY G VC+S+
Sbjct: 34 NVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISI 93
Query: 367 LDEEKD-----------WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYD 513
L D W P T++ I+L I +L+ PN + PA EA + NR E+
Sbjct: 94 LHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDNRAEFR 153
Query: 514 KRV 522
K+V
Sbjct: 154 KKV 156
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 86.6 bits (205), Expect = 9e-18
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 11/123 (8%)
Frame = +1
Query: 187 NLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 366
N+ W I G T +EGG + M F +YP+SPP +F ++HPNVY G VC+S+
Sbjct: 65 NIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISI 124
Query: 367 LDEEKD-----------WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYD 513
L D W P T++ I+L I +L+ PN + PA EA + R E+
Sbjct: 125 LHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFK 184
Query: 514 KRV 522
K+V
Sbjct: 185 KKV 187
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 86.2 bits (204), Expect = 1e-17
Identities = 42/105 (40%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Frame = +1
Query: 187 NLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 363
NL IPG GT +EGG +++ + D YP PPK +F ++HPN+ SG +CL
Sbjct: 31 NLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLD 90
Query: 364 LLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQN 498
+L ++ W PA+T+K L+ IQ LL+ P KDP A Y +N
Sbjct: 91 ILKDQ--WSPALTLKTALVSIQALLSAPEPKDPQDAVVAEQYMKN 133
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 80.2 bits (189), Expect = 8e-16
Identities = 45/150 (30%), Positives = 76/150 (50%), Gaps = 6/150 (4%)
Frame = +1
Query: 94 SARLAEERKAWRKDHPFGFVARPMKNP-DGSLNLMTW---ECAIPGKKGTAWEGGLYKLR 261
S R+ +E K D P G + + +GS + T+ + I G + T + G++ L+
Sbjct: 8 SLRMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLK 67
Query: 262 MIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD--EEKDWRPAITIKQILLGIQDL 435
+ + YP PP F P++HPN+ SG +CL +L+ + W+P++ I +L ++ L
Sbjct: 68 IQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLL 127
Query: 436 LNEPNVKDPAQAEAYTIYCQNRLEYDKRVR 525
L+EPN D E Y NR +D + R
Sbjct: 128 LSEPNPDDGLMCEVSREYKYNRQTFDYKAR 157
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 79.4 bits (187), Expect = 1e-15
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Frame = +1
Query: 205 CA-IPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEK 381
CA I G GT +E GL+++++ D+P SPPK F +FHPNV +G +C++ L +K
Sbjct: 43 CADIEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTL--KK 100
Query: 382 DWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDKRVR 525
DW P++ ++ +L ++ LL EP + +A + +N EY + R
Sbjct: 101 DWNPSLGLRHVLSVVRCLLIEPFPESALNEQAGKMLLENYDEYARHAR 148
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 79.4 bits (187), Expect = 1e-15
Identities = 40/115 (34%), Positives = 64/115 (55%)
Frame = +1
Query: 172 PDGSLNLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGT 351
P G NL W I G GT +EGG++ L +IF DYP PPK F+ ++H NV +G
Sbjct: 60 PKGD-NLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGD 118
Query: 352 VCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 516
+ +++L + W PA+TI ++L I+ + +P PA +Y +R ++D+
Sbjct: 119 LSVNILRD--SWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREKHDE 171
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 79.0 bits (186), Expect = 2e-15
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Frame = +1
Query: 79 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKL 258
+S IA RL +E W+ + P GF R N L W + G GT + Y L
Sbjct: 12 LSKIACNRLQKELSEWQVNPPTGFKHRVTDN------LQKWVIEVTGAPGTLYANETYNL 65
Query: 259 RMIFKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDL 435
++ F YP P+ F PP HP++Y +G +CL +L + W PA+T+ + + I +
Sbjct: 66 QVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSM 123
Query: 436 L-NEPNVKDPAQAEAYTIYCQN 498
L + P + P + Y C+N
Sbjct: 124 LSSSPEKQRPTDNDRYVKNCKN 145
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 79.0 bits (186), Expect = 2e-15
Identities = 39/114 (34%), Positives = 63/114 (55%)
Frame = +1
Query: 88 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMI 267
+AS R+ +E K +KD P A P+ ++ W+ I G + + GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPAESPYSGGVFLVTIH 55
Query: 268 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQ 429
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++ L Q
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVTLIFQ 107
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 79.0 bits (186), Expect = 2e-15
Identities = 34/92 (36%), Positives = 56/92 (60%)
Frame = +1
Query: 187 NLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 366
N+ + I G + +EGG++KL + ++YP + PK +F ++HPN+ G +CL +
Sbjct: 33 NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDI 92
Query: 367 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDP 462
L ++ W PA+ I+ +LL IQ LL+ PN DP
Sbjct: 93 LKDK--WSPALQIRTVLLSIQALLSAPNPDDP 122
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 79.0 bits (186), Expect = 2e-15
Identities = 34/92 (36%), Positives = 56/92 (60%)
Frame = +1
Query: 187 NLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 366
N+ + I G + +EGG++KL + ++YP + PK +F ++HPN+ G +CL +
Sbjct: 33 NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDI 92
Query: 367 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDP 462
L ++ W PA+ I+ +LL IQ LL+ PN DP
Sbjct: 93 LKDK--WSPALQIRTVLLSIQALLSAPNPDDP 122
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 77.4 bits (182), Expect = 6e-15
Identities = 33/84 (39%), Positives = 53/84 (63%)
Frame = +1
Query: 211 IPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWR 390
I G + +EGG++KL + ++YP + PK +F ++HPN+ G +CL +L ++ W
Sbjct: 8 ILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK--WS 65
Query: 391 PAITIKQILLGIQDLLNEPNVKDP 462
PA+ I+ +LL IQ LL+ PN DP
Sbjct: 66 PALQIRTVLLSIQALLSAPNPDDP 89
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 76.2 bits (179), Expect = 1e-14
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 2/142 (1%)
Frame = +1
Query: 79 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKL 258
+S IA RL +E W+ + P GF K D NL W + G GT + Y+L
Sbjct: 12 LSKIACNRLQKELSEWQLNPPTGF---RHKVTD---NLQKWTIDVTGAPGTLYANETYQL 65
Query: 259 RMIFKDDYPSSPPKCKF-EPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDL 435
++ F + YP P+ F P HP++Y +G +CL +L + W PA+T+ + + I +
Sbjct: 66 QVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYD--SWSPAMTVNSVCISILSM 123
Query: 436 L-NEPNVKDPAQAEAYTIYCQN 498
L + P + PA + Y C+N
Sbjct: 124 LSSSPAKQRPADNDRYVKNCKN 145
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 75.4 bits (177), Expect = 2e-14
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Frame = +1
Query: 79 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKL 258
+S IA+ RL +E W+ + P GF K D NL W + G GT + Y+L
Sbjct: 12 LSKIATNRLQKELVEWQMNPPTGF---KHKVTD---NLQRWIIEVIGAPGTLYANDTYQL 65
Query: 259 RMIFKDDYPSSPPKCKF-EPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDL 435
++ F + YP P+ F P HP++Y +G +CL +L + W PA+T+ I + I +
Sbjct: 66 QVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYD--SWSPAMTVSSICISILSM 123
Query: 436 LNEPNVKD-PAQAEAYTIYCQN 498
L+ K P + Y C+N
Sbjct: 124 LSSSTEKQRPTDNDRYVKNCKN 145
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 73.7 bits (173), Expect = 7e-14
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 2/142 (1%)
Frame = +1
Query: 79 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKL 258
++ IA+ RL +E W+ + P GF R S NL W + G GT + Y+L
Sbjct: 12 LTKIATNRLQKEFMEWQTNPPSGFKHRV------SDNLQRWIIEVHGVPGTLYANETYQL 65
Query: 259 RMIFKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDL 435
++ F + YP P+ F+ P HP++Y +G +CL +L + W PA+ + I L I +
Sbjct: 66 QVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYD--SWSPAMRLSSICLSILSM 123
Query: 436 LNEPNVKD-PAQAEAYTIYCQN 498
L+ +VK P + Y C++
Sbjct: 124 LSSSSVKQKPKDNDHYLKNCKH 145
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 73.7 bits (173), Expect = 7e-14
Identities = 38/118 (32%), Positives = 59/118 (50%)
Frame = +1
Query: 172 PDGSLNLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGT 351
P+G +LM +E I +G G + + YP PK K + ++HPN+ G
Sbjct: 54 PNGKNDLMNFEVTIKPDEGYYLSGN-FVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGN 112
Query: 352 VCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDKRVR 525
VCL++L E DW+P + I ++ G+ L EPN +DP EA + N ++ VR
Sbjct: 113 VCLNILRE--DWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVR 168
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 68.5 bits (160), Expect = 3e-12
Identities = 34/113 (30%), Positives = 55/113 (48%)
Frame = +1
Query: 187 NLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 366
N+ WE + G G +E G++ + + YP PPK F+ +FHPN+ G + + +
Sbjct: 58 NIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEIFVDI 117
Query: 367 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDKRVR 525
L W A+TI +LL I +L+ P A +Y ++R Y+K R
Sbjct: 118 LGSR--WSSALTINLVLLSICSILSNPVEPLLVSNHAARLYQKDRKAYEKVAR 168
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 68.1 bits (159), Expect = 3e-12
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Frame = +1
Query: 187 NLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 363
N+ W I G T +EGG+++L + YP PP+ +F +FHPNV + +G +CL
Sbjct: 33 NIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLD 92
Query: 364 LLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEA 477
+L + W PA T++ + I L+ P P ++
Sbjct: 93 IL--KNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDS 128
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 66.9 bits (156), Expect = 8e-12
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Frame = +1
Query: 217 GKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRP 393
G K + +EGG++K+R+ D YP P F ++HPNV SG+VCL ++++ W P
Sbjct: 38 GPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQ--TWSP 95
Query: 394 AITIKQIL-LGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDKRVR 525
+ + + LL PN DP EA + ++R Y++RV+
Sbjct: 96 MFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVK 140
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 65.7 bits (153), Expect = 2e-11
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Frame = +1
Query: 217 GKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRP 393
G K + ++GG++K+R+ D YP P F ++HPNV SG+VCL ++++ W P
Sbjct: 38 GPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQ--TWSP 95
Query: 394 AITIKQIL-LGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDKRVR 525
+ + + LL PN DP EA + ++R Y++RV+
Sbjct: 96 MFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVK 140
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 63.7 bits (148), Expect = 7e-11
Identities = 26/78 (33%), Positives = 47/78 (60%)
Frame = +1
Query: 187 NLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 366
N+ + I G + +EGG++KL + ++YP + PK +F ++HPN+ G +CL +
Sbjct: 33 NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDI 92
Query: 367 LDEEKDWRPAITIKQILL 420
L ++ W PA+ I+ +LL
Sbjct: 93 LKDK--WSPALQIRTVLL 108
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 58.8 bits (136), Expect = 2e-09
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Frame = +1
Query: 217 GKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRP 393
G + ++GG++K+++ + YP P F ++HPNV SG VCL ++++ W P
Sbjct: 38 GPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQ--TWSP 95
Query: 394 AITIKQILLG-IQDLLNEPNVKDPAQAEAYTIYCQNRLEYDKRVR 525
+ + + LL PN DP EA ++ ++R Y+ +V+
Sbjct: 96 MFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVK 140
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 54.8 bits (126), Expect = 3e-08
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Frame = +1
Query: 100 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMIFKDD 279
RL EE + K G V+ M + D L + +W I G TA+EG +++L++ D
Sbjct: 15 RLLEELERGEKGIGDGTVSYGMDDADDIL-MQSWTGTILGPHNTAYEGKIFQLKLFCGKD 73
Query: 280 YPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRPAITIKQILLGI-QDLLNEPNV 453
YP SPP +F+ + V P +G V S +WR T++ +L+ + +++++ N
Sbjct: 74 YPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKKEMMSSQNR 133
Query: 454 K 456
K
Sbjct: 134 K 134
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 54.0 bits (124), Expect = 6e-08
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Frame = +1
Query: 100 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMIFKDD 279
RL EE + K G V+ M + D + + +W I G TA+EG +++L++ +
Sbjct: 15 RLLEELERGEKGIGDGTVSYGMDDAD-DIYMQSWTGTILGPPNTAYEGKIFQLKLFCGKE 73
Query: 280 YPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRPAITIKQILLGI-QDLLNEPNV 453
YP SPP +F+ + V P +G V SL +WR T++ IL+ + ++++ N
Sbjct: 74 YPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDILVKLKKEMMTSHNR 133
Query: 454 K 456
K
Sbjct: 134 K 134
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 53.6 bits (123), Expect = 8e-08
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Frame = +1
Query: 100 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMIFKDD 279
R+ +E + KD P R ++ ++L+ I G +GT + GL+ + F D
Sbjct: 336 RIQDEWRILEKDLPEMIFVRAYES---RMDLL--RAVIIGAQGTPYHDGLFFFDIFFPDT 390
Query: 280 YPSSPPKCKFEPP--LFHPNVYPSGTVCLSLL-----DEEKDWRP-AITIKQILLGIQDL 435
YPS+PP + +PN+Y G VCLSLL ++ + W P T+ Q+L+ IQ L
Sbjct: 391 YPSTPPIVHYHSGGLRINPNLYNCGKVCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQGL 450
Query: 436 L--NEPNVKDP 462
+ +P +P
Sbjct: 451 ILNQKPYFNEP 461
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 52.8 bits (121), Expect = 1e-07
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Frame = +1
Query: 100 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMIFKDD 279
RL +E +A K+ VARP N +++ W + G +GT + GG Y ++ F +
Sbjct: 9 RLQKEYRALCKEPVSHVVARPSPN-----DILEWHYVLEGSEGTPFAGGFYYGKIKFPPE 63
Query: 280 YPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD-EEKDWRPAITIKQILLGI 426
YP PP P + +CLS+ D + W P ++ IL G+
Sbjct: 64 YPYKPPGITMTTP--NGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGL 111
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 52.8 bits (121), Expect = 1e-07
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Frame = +1
Query: 211 IPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSLLD---- 372
I G +GT + GL+ + F D YPS PPK + +PN+Y G VCLSL+
Sbjct: 641 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRINPNLYKCGKVCLSLISTWTG 700
Query: 373 -EEKDWRP-AITIKQILLGIQDL-LNE-PNVKDP 462
+ + W P T+ Q+L+ IQ L LNE P +P
Sbjct: 701 KKREKWLPKESTMLQLLVSIQALILNEKPYYNEP 734
Score = 51.2 bits (117), Expect = 4e-07
Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Frame = +1
Query: 211 IPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSLL----- 369
I G +GT + GL+ + F D YPS PP + +PN+Y G VCLSLL
Sbjct: 307 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYNCGKVCLSLLGTWAG 366
Query: 370 DEEKDWRP-AITIKQILLGIQDL-LNE-PNVKDPAQAEA 477
+ W P T+ Q+L+ IQ L LNE P +P ++
Sbjct: 367 SAREKWLPNESTMLQLLVSIQALILNEKPYFNEPGYVQS 405
Score = 36.3 bits (80), Expect = 0.013
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 211 IPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSL 366
I G +GT + GL+ + F D YPS PP + +PN+Y G V +S+
Sbjct: 953 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYYHSGGLRINPNLYNCGKVLVSI 1006
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 52.8 bits (121), Expect = 1e-07
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Frame = +1
Query: 100 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMIFKDD 279
RL +E +A K+ VARP N +++ W + G +GT + GG Y ++ F +
Sbjct: 9 RLQKEYRALCKEPVSHVVARPSPN-----DILEWHYVLEGSEGTPFAGGFYYGKIKFPPE 63
Query: 280 YPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD-EEKDWRPAITIKQILLGI 426
YP PP P + +CLS+ D + W P ++ IL G+
Sbjct: 64 YPYKPPGITMTTP--NGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGL 111
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 46.8 bits (106), Expect = 9e-06
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Frame = +1
Query: 91 ASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMIF 270
A R+ +E K + + F++ P++ N+ W+ AI G T +EGG+Y R+
Sbjct: 12 AVKRILQEVKEMQANPSDDFMSLPLEE-----NIFEWQFAIRGPGDTEFEGGIYHGRIQL 66
Query: 271 KDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD-EEKDWRPAITIKQILLGI 426
DYP PP P + + +CLS+ + + W+P+ +++ L+ +
Sbjct: 67 PADYPFKPPSFMLLTP--NGRFETNTKICLSISNYHPEHWQPSWSVRTALVAL 117
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 46.4 bits (105), Expect = 1e-05
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Frame = +1
Query: 211 IPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSLLDE--- 375
I G GT ++ GL+ DYPS PP + +PN+Y G VCLSLL+
Sbjct: 886 IVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWTG 945
Query: 376 --EKDWRP-AITIKQILLGIQDLL 438
+ W P + +I Q+L+ +Q L+
Sbjct: 946 RGNEVWDPKSSSILQVLVSLQGLV 969
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 44.4 bits (100), Expect = 5e-05
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Frame = +1
Query: 208 AIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSLLDE-- 375
A+ G GT + GL+ ++ YP PP + +PN+Y SG VCLSLL+
Sbjct: 697 ALVGAPGTPYHDGLFFFDIMLPPQYPHEPPMVHYHSGGMRLNPNLYESGRVCLSLLNTWS 756
Query: 376 ---EKDWRP-AITIKQILLGIQDL-LNE 444
+ W + +I Q+LL Q L LNE
Sbjct: 757 GSGTEVWNAGSSSILQLLLSFQALVLNE 784
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 43.6 bits (98), Expect = 8e-05
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Frame = +1
Query: 100 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMIFKDD 279
RL EE + K G V+ M + D + + +W I G T EG +Y+L++ D
Sbjct: 16 RLLEELERGEKGIGDGTVSYGMDDGD-DIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKD 74
Query: 280 YPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRPAITIKQIL 417
YP PP +F + V + +G V +W+ T++ IL
Sbjct: 75 YPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDIL 121
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 43.2 bits (97), Expect = 1e-04
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Frame = +1
Query: 100 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMIFKDD 279
RL EE + K G V+ M + D + + +W I G T EG +Y+L++ D
Sbjct: 17 RLLEELERGEKGIGDGTVSYGMDDGD-DIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKD 75
Query: 280 YPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRPAITIKQILLGIQ 429
YP PP +F + V + +G V +W+ T++ IL+ ++
Sbjct: 76 YPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDILVQLK 126
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 39.1 bits (87), Expect = 0.002
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Frame = +1
Query: 100 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKG-TAWEGGLYKLRMIFKD 276
RL EE + K G V+ M + D + + +W I G T EG +Y+L++
Sbjct: 16 RLLEELERGEKGIGDGTVSYGMDDGD-DIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDK 74
Query: 277 DYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRPAITIKQIL 417
DYP PP +F + V + +G V +W+ T++ IL
Sbjct: 75 DYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDIL 122
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 38.7 bits (86), Expect = 0.002
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Frame = +1
Query: 100 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKG-TAWEGGLYKLRMIFKD 276
RL EE + K G V+ M + D + + +W I G T EG +Y+L++
Sbjct: 17 RLLEELERGEKGIGDGTVSYGMDDGD-DIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDK 75
Query: 277 DYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRPAITIKQILLGIQ 429
DYP PP +F + V + +G V +W+ T++ IL+ ++
Sbjct: 76 DYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDILVQLK 127
>At1g11780.1 68414.m01352 oxidoreductase, 2OG-Fe(II) oxygenase
family protein low similarity to alkB proteins from Homo
sapiens [SP|Q13686], Caulobacter crescentus
[GI:2055386]; contains Pfam profile PF03171:
oxidoreductase, 2OG-Fe(II) oxygenase family
Length = 345
Score = 35.1 bits (77), Expect = 0.030
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = -3
Query: 253 YKVHLPKQSLFFQVSHIPRSLDLAIHLDFSLVSQRNQRDG 134
YK++ + S F + +P+ +DL+ LDF+L+SQ DG
Sbjct: 23 YKLYYEQDSKFSRKKKLPKPIDLSELLDFNLISQNFNNDG 62
>At1g33060.2 68414.m04076 no apical meristem (NAM) family protein
similar to NAC1 GB:AAF68626 GI:7716952 from (Medicago
truncatula)
Length = 652
Score = 31.1 bits (67), Expect = 0.48
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = -3
Query: 253 YKVHLPKQSLFFQVSHIPRSLDLAIHLDFSLVSQRNQRD 137
Y V+ P+QS F Q SH+ R++ + +F S+ NQRD
Sbjct: 452 YNVNQPEQSSFEQ-SHVDRNISPSNIFEFKARSRENQRD 489
>At1g33060.1 68414.m04075 no apical meristem (NAM) family protein
similar to NAC1 GB:AAF68626 GI:7716952 from (Medicago
truncatula)
Length = 648
Score = 31.1 bits (67), Expect = 0.48
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = -3
Query: 253 YKVHLPKQSLFFQVSHIPRSLDLAIHLDFSLVSQRNQRD 137
Y V+ P+QS F Q SH+ R++ + +F S+ NQRD
Sbjct: 452 YNVNQPEQSSFEQ-SHVDRNISPSNIFEFKARSRENQRD 489
>At3g22470.1 68416.m02840 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repea
Length = 619
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 441 IEQILYTKEYLLDCYCRTPILLF 373
IE +YT +++CYCR LLF
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLF 123
>At3g05230.1 68416.m00571 signal peptidase subunit family protein
contains Pfam profile: PF04573 signal peptidase subunit
Length = 167
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 124 WRKDHPFGFVARPMKNPDGSLNLMT-WECAIPGKK 225
W F FVA + P SLN ++ W+ IP K+
Sbjct: 75 WNTKQVFVFVAAEYETPKNSLNQVSLWDAIIPAKE 109
>At2g40470.1 68415.m04994 LOB domain protein 15 / lateral organ
boundaries domain protein 15 (LBD15) identical to
SP|Q8L5T5 LOB domain protein 15 {Arabidopsis thaliana};
similar to ASYMMETRIC LEAVES2 [Arabidopsis thaliana]
GI:19918971
Length = 224
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 100 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECA 210
++ E AW H + RPM P G+LN +T CA
Sbjct: 14 KIKREADAW--PHQMAGIRRPMSGPPGTLNTIT-PCA 47
>At5g46030.1 68418.m05661 expressed protein contains Pfam profile
PF05129: Putative zinc binding domain (DUF701)
Length = 120
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 308 LNLLFSTPMCTHQEQCVCLS*MKRRIG 388
L+ +FS P C H C+ MK IG
Sbjct: 19 LDTIFSCPFCNHGSSVECIIDMKHLIG 45
>At2g20250.1 68415.m02366 hypothetical protein
Length = 559
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = -2
Query: 392 GRQSFSSSRRDRHTVPDGYTLGWKRGG 312
GR S SS RDR+TVP G L + GG
Sbjct: 141 GRSS-SSFSRDRYTVPSGDNLRSESGG 166
>At1g31250.1 68414.m03825 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
similar to prolin rich protein GB:S44189 GI:433706 from
[Zea mays]
Length = 165
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 283 PSSPPKCKFEPPLFHPNVYPSGT 351
P++ P K PP P+V P+GT
Sbjct: 113 PNASPSVKLTPPYASPSVRPTGT 135
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,248,585
Number of Sequences: 28952
Number of extensions: 280117
Number of successful extensions: 813
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 984125600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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