Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_H04
         (357 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   4.4  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   4.4  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   4.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   7.6  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   7.6  

>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 214 RNIISYDKGFFSWNKSDVVFL*ERG 140
           R + S     + W   D+VFL + G
Sbjct: 171 RQVCSLRMASYGWTTDDLVFLWKEG 195


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 214 RNIISYDKGFFSWNKSDVVFL*ERG 140
           R + S     + W   D+VFL + G
Sbjct: 171 RQVCSLRMASYGWTTDDLVFLWKEG 195


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 210 FRAFLSRYYTSFVLICL 260
           FR F   Y +SFVL+C+
Sbjct: 117 FRMF-GLYLSSFVLVCI 132


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 115 NIRRNINAPPFLKEKLRHFCSRKKNLYHK 201
           N    INA   +K  +R F   K + +HK
Sbjct: 501 NFHITINADKPMKAAIRIFIGPKYDSHHK 529


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 115 NIRRNINAPPFLKEKLRHFCSRKKNLYHK 201
           N    INA   +K  +R F   K + +HK
Sbjct: 501 NFHITINADKPMKAAIRIFIGPKYDSHHK 529


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,970
Number of Sequences: 438
Number of extensions: 1283
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8308335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)