Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_H03
         (564 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_55654| Best HMM Match : Toxin_7 (HMM E-Value=9.7)                   31   0.49 
SB_2295| Best HMM Match : C1_1 (HMM E-Value=2.5)                       28   4.6  
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   6.1  
SB_10406| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.0  

>SB_55654| Best HMM Match : Toxin_7 (HMM E-Value=9.7)
          Length = 194

 Score = 31.5 bits (68), Expect = 0.49
 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
 Frame = +1

Query: 298 TRFLDSGCIVRDYWASSCVGHIIIPFIHCWKNCTFYRVRDRTSAATGAWYRFRYSIAHQI 477
           T + D GC V D    S        + +C  N     +  RT+ A+  W R    I +  
Sbjct: 95  TMYADYGCSVNDSDMGSTYNFCDNAY-YC-ANWKINAIPCRTNTASNTWCRAPGLITYAF 152

Query: 478 -IHGNPSDTILRYCSIRMIFKD 540
                PS   L+YC+IR +++D
Sbjct: 153 RFQTMPSGQALKYCNIRTLWQD 174


>SB_2295| Best HMM Match : C1_1 (HMM E-Value=2.5)
          Length = 363

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = +2

Query: 179 ITRGVYANPEDAAIAKGKVKFDDQRVERCRRAHLNDLENIPAFW--ILGALYVTTGPA 346
           +T  ++ NP+     K   K  D+RV+    + +  L+N+   W  + G L ++ G A
Sbjct: 248 VTETIHRNPQTLLQFKNYDKVKDERVDTLLASLMRPLDNLHKLWGLVQGLLVLSHGQA 305


>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2101

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 432  CGRGTIAYTIECTILPTVYKRNNNVAHATAGP 337
            CG   + Y+ ECT+  T  + + N+   + GP
Sbjct: 1453 CGSDRMTYSNECTLTQTACQESKNLTVVSQGP 1484


>SB_10406| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 268

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 236 KFDDQRVERCRRAHLNDLENIPAFWILGALYV 331
           K + Q+ E C  AH  ++E IP    L  LY+
Sbjct: 227 KDEKQKTEDCYSAHQENIEEIPLSSALAPLYI 258


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,706,028
Number of Sequences: 59808
Number of extensions: 351546
Number of successful extensions: 805
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1325051197
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)