Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_H03
         (564 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    22   4.9  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    22   4.9  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    22   4.9  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    22   4.9  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   6.5  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   8.6  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.6  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   8.6  

>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +1

Query: 406 RVRDRTSAATGAWYRFRYSIAHQIIHGNPSDTILRYCSIRMI 531
           R RDRT        +   S+ +  IH N +   L+Y +I  I
Sbjct: 288 RSRDRTERERSREPKIISSLLNNTIHNNNNYKKLQYYNINYI 329


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +1

Query: 406 RVRDRTSAATGAWYRFRYSIAHQIIHGNPSDTILRYCSIRMI 531
           R RDRT        +   S+ +  IH N +   L+Y +I  I
Sbjct: 299 RSRDRTERERSREPKIISSLLNNTIHNNNNYKKLQYYNINYI 340


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +1

Query: 406 RVRDRTSAATGAWYRFRYSIAHQIIHGNPSDTILRYCSIRMI 531
           R RDRT        +   S+ +  IH N +   L+Y +I  I
Sbjct: 299 RSRDRTERERSREPKIISSLLNNTIHNNNNYKKLQYYNINYI 340


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +1

Query: 406 RVRDRTSAATGAWYRFRYSIAHQIIHGNPSDTILRYCSIRMI 531
           R RDRT        +   S+ +  IH N +   L+Y +I  I
Sbjct: 288 RSRDRTERERSREPKIISSLLNNTIHNNNNYKKLQYYNINYI 329


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 407 VYAIVPLPQPARGIAFGIPLLIKLYMGTQV 496
           +YA  PL + +  I F IP+LI L + T++
Sbjct: 206 IYADFPLYELSTIIFFLIPMLIILVVYTRM 235


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 363 NVAHATAGPVVTYNAPRIQKAGMFSKSL 280
           NVA A+A P+V Y      + G    SL
Sbjct: 157 NVAPASADPMVNYTLGHHHQNGATPSSL 184


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 411 TRSYLCRNRRVVSLSVFHCSSN 476
           T S +C N +V+     H SSN
Sbjct: 291 TNSMICLNGQVLKRESIHNSSN 312


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 385 WKNCTFYRVRDRT 423
           WKN  FY+V  R+
Sbjct: 25  WKNAIFYQVYPRS 37


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,928
Number of Sequences: 438
Number of extensions: 3416
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)