Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_H02
         (598 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               22   4.0  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    22   5.3  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    22   5.3  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   5.3  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   5.3  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   9.2  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   9.2  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   9.2  

>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 69  CTYKTLCDSVERTSTDDIDDEVATKLEEM 155
           C   TLC   E  + DDID  +  + E M
Sbjct: 21  CDDITLCLKQENLNLDDIDSLLEDESERM 49


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 300 VYSFHYRSLDQ*LQPRW 250
           V +FH+R+ D+ + P W
Sbjct: 346 VLNFHHRTPDRYVMPSW 362


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 300 VYSFHYRSLDQ*LQPRW 250
           V +FH+R+ D+ + P W
Sbjct: 346 VLNFHHRTPDRYVMPSW 362


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 268 ITTAPVDTCRMNSTTLGHGLCRVV 197
           + T  VD C  NST L     RV+
Sbjct: 297 VATILVDDCGCNSTMLNENPARVM 320


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 268 ITTAPVDTCRMNSTTLGHGLCRVV 197
           + T  VD C  NST L     RV+
Sbjct: 297 VATILVDDCGCNSTMLNENPARVM 320


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 315 ILQLAGERSSGLLEECRQHVLGVSGAQCLQLDLLH 419
           ++  +G +S  +LEE     L  S     + DLLH
Sbjct: 635 VILSSGAKSPTVLEELTHGTLAASTLYSKRPDLLH 669


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 315 ILQLAGERSSGLLEECRQHVLGVSGAQCLQLDLLH 419
           ++  +G +S  +LEE     L  S     + DLLH
Sbjct: 635 VILSSGAKSPTVLEELTHGTLAASTLYSKRPDLLH 669


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 315 ILQLAGERSSGLLEECRQHVLGVSGAQCLQLDLLH 419
           ++  +G +S  +LEE     L  S     + DLLH
Sbjct: 635 VILSSGAKSPTVLEELTHGTLAASTLYSKRPDLLH 669


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,568
Number of Sequences: 438
Number of extensions: 3235
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)