Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_H01
(538 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g36670.2 68415.m04498 aspartyl protease family protein contai... 30 1.1
At3g02740.1 68416.m00266 aspartyl protease family protein contai... 29 1.5
At1g08210.1 68414.m00907 aspartyl protease family protein contai... 29 1.5
At4g34220.1 68417.m04862 leucine-rich repeat transmembrane prote... 29 2.6
At3g61270.1 68416.m06857 expressed protein 28 3.4
At2g45830.2 68415.m05700 expressed protein 28 3.4
At2g45830.1 68415.m05699 expressed protein 28 3.4
At4g21240.1 68417.m03071 F-box family protein contains F-box dom... 28 4.5
At1g14520.1 68414.m01721 oxygenase-related similar to myo-inosit... 28 4.5
At5g22850.1 68418.m02671 aspartyl protease family protein contai... 27 6.0
At3g28850.1 68416.m03599 glutaredoxin family protein 27 6.0
At1g65180.1 68414.m07390 DC1 domain-containing protein contains ... 27 6.0
>At2g36670.2 68415.m04498 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 507
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -2
Query: 198 RQAYLAFIVDISIDGKTIPVLTGVTMTNIWRGKPP 94
RQ+ + +VD + G + P L G+ T + G PP
Sbjct: 76 RQSSVGGVVDFPVQGSSDPYLVGLYFTKVKLGSPP 110
>At3g02740.1 68416.m00266 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 488
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -2
Query: 225 GIVSKHTLHRQAYLAFIVDISIDGKTIPVLTGVTMTNIWRGKPPR 91
G + H +HR + L +DI + G + P G+ I G P R
Sbjct: 52 GALRAHDVHRHSRLLSAIDIPLGGDSQPESIGLYFAKIGLGTPSR 96
>At1g08210.1 68414.m00907 aspartyl protease family protein contains
Pfam profile PF00026: Eukaryotic aspartyl protease;
similar to CND41, chloroplast nucleoid DNA binding
protein (GI:2541876) {Nicotiana tabacum}
Length = 492
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 216 SKHTLHRQAYLAFIVDISIDGKTIPVLTGVTMTNIWRGKPPR 91
++H Q+ + +V+ +DG + P L G+ T + G PPR
Sbjct: 54 ARHGRLLQSPVGGVVNFPVDGASDPFLVGLYYTKVKLGTPPR 95
>At4g34220.1 68417.m04862 leucine-rich repeat transmembrane protein
kinase, putative protein kinase TMKL1, Arabidopsis
thaliana, PID:E353150
Length = 757
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -2
Query: 174 VDISIDGKTIPVLTGVTMTNIWRGKPPRVPRGNRSLCGKPRRLLYHQLSMLLKP 13
VD+S + T P+ + +++ N + GN+ LCGKP ++L S L P
Sbjct: 249 VDLSFNNLTGPIPSSLSLLN----QKAESFSGNQELCGKPLKILCSIPSTLSNP 298
>At3g61270.1 68416.m06857 expressed protein
Length = 498
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 416 WSYKDVMLMSSDNMLRM*KPLFY-LYLNNQINKQHFLKVK 532
WS + +M+ D+M KP FY Y+ + QH+ ++
Sbjct: 318 WSVSEKYIMACDSMTLYVKPRFYDFYIRGMMPLQHYWPIR 357
>At2g45830.2 68415.m05700 expressed protein
Length = 382
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 416 WSYKDVMLMSSDNMLRM*KPLFY-LYLNNQINKQHFLKVK 532
WS + +M+ D+M +P+FY Y+ + QH+ ++
Sbjct: 200 WSVSEKYIMACDSMTLYVRPMFYDFYVRGMMPLQHYWPIR 239
>At2g45830.1 68415.m05699 expressed protein
Length = 523
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 416 WSYKDVMLMSSDNMLRM*KPLFY-LYLNNQINKQHFLKVK 532
WS + +M+ D+M +P+FY Y+ + QH+ ++
Sbjct: 341 WSVSEKYIMACDSMTLYVRPMFYDFYVRGMMPLQHYWPIR 380
>At4g21240.1 68417.m03071 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 142 RYGFTIN*YVYYEGEIRLSVECMF 213
R G IN +VYYE +IR V+ +F
Sbjct: 227 RVGTCINGHVYYEAQIRFKVDDIF 250
>At1g14520.1 68414.m01721 oxygenase-related similar to myo-inositol
oxygenase [Sus scrofa] gi|17432544|gb|AAL39076
Length = 311
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 197 RWSVCFDTMPLGFPFDREIYMPTFFTNN 280
+W+V DT P+G FD I +F N
Sbjct: 163 QWAVVGDTFPVGCAFDESIVHHKYFKEN 190
>At5g22850.1 68418.m02671 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 493
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 186 LAFIVDISIDGKTIPVLTGVTMTNIWRGKPPR 91
L ++D +DG P + G+ T + G PPR
Sbjct: 61 LGGVIDFPVDGTFDPFVVGLYYTKLRLGTPPR 92
>At3g28850.1 68416.m03599 glutaredoxin family protein
Length = 428
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 223 HCVETYTPPTSVSRLHSRH 167
HC Y+PP V R HS H
Sbjct: 14 HCRRGYSPPVDVQRSHSVH 32
>At1g65180.1 68414.m07390 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 653
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Frame = -2
Query: 105 GKPPRVPRGNRSLCGKP--RRLLYH 37
GKPP GN SLCGK + YH
Sbjct: 186 GKPPAYTDGNCSLCGKKIFDEMFYH 210
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,912,718
Number of Sequences: 28952
Number of extensions: 216177
Number of successful extensions: 467
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 993966856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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