Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_G24
(537 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032630-4|CAA21561.1| 212|Caenorhabditis elegans Hypothetical ... 32 0.23
Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr... 29 2.1
U58756-3|AAC48084.2| 181|Caenorhabditis elegans Hypothetical pr... 29 2.8
U58756-2|AAC48083.2| 322|Caenorhabditis elegans Hypothetical pr... 29 2.8
U41268-5|AAA82438.1| 349|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical pr... 27 6.5
AF025462-4|AAN72424.1| 123|Caenorhabditis elegans Hypothetical ... 27 8.6
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 27 8.6
>AL032630-4|CAA21561.1| 212|Caenorhabditis elegans Hypothetical
protein Y62H9A.4 protein.
Length = 212
Score = 32.3 bits (70), Expect = 0.23
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +2
Query: 5 ALFVLCLAAAVSAAPYYGMGYNQMPFHPEHHHNRLRSPYFGEDVFDTGRFWSELSSELRE 184
ALF+ +A AV + Y + +P HH N + Y D D+ +EL S
Sbjct: 3 ALFLSVIACAVVVSANQYNDYGTISHYPGHHSN---NRYSTSDSSDSSE--NELKSRSNS 57
Query: 185 LDNMLADFYRKF-PTPASSSQGIEGNEYK 268
D ++ + P P +++ G GNEY+
Sbjct: 58 -DERYPEYPGVYAPQPPATNYGTNGNEYR 85
>Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical protein
C11E4.6 protein.
Length = 1170
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -3
Query: 88 RMERHLVVPHTVVRCRRHGRSKTENK 11
RM++ L + T+VRCR + + TEN+
Sbjct: 1143 RMDKSLPIEGTMVRCRHNSQQTTENQ 1168
>U58756-3|AAC48084.2| 181|Caenorhabditis elegans Hypothetical
protein F58F9.3a protein.
Length = 181
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 179 RELDNMLADFYRKFPTPASSSQGIEGNEYKVTIPLTSFDEKDI 307
+ D +L F + +++QG+E YK+T+ EKD+
Sbjct: 93 KNADGILVFSTNNFASAKATNQGLEIGRYKITVQAVKPSEKDL 135
>U58756-2|AAC48083.2| 322|Caenorhabditis elegans Hypothetical
protein F58F9.3b protein.
Length = 322
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 179 RELDNMLADFYRKFPTPASSSQGIEGNEYKVTIPLTSFDEKDI 307
+ D +L F + +++QG+E YK+T+ EKD+
Sbjct: 93 KNADGILVFSTNNFASAKATNQGLEIGRYKITVQAVKPSEKDL 135
>U41268-5|AAA82438.1| 349|Caenorhabditis elegans Hypothetical
protein T14G12.6 protein.
Length = 349
Score = 28.7 bits (61), Expect = 2.8
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = -3
Query: 220 ELSVEVGEHVVQLA*LAGEFGPEPTGIEDVLAEVWASQPIVMVFRMERHLVVPHTVVRCR 41
EL+ E+G+ + +A A P PT D L + + P +V + + + + RC+
Sbjct: 64 ELTCEIGDFPIAVAAFADSEIPPPTAAADELGILPPNSPEQIVLGLNAYYGL---LQRCK 120
Query: 40 RHGRSKTENK*SD 2
+ + T+NK SD
Sbjct: 121 QWKANFTKNKTSD 133
>Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical
protein F32H2.1b protein.
Length = 928
Score = 27.5 bits (58), Expect = 6.5
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 266 KVTIPLT--SFDEKDIVVKARTGLLMVQAVHKYEGDV 370
K T+P T SFD ++ KAR+GL + A H Y DV
Sbjct: 712 KSTLPPTAASFDLHKMLQKARSGLNRLSAEHFYPLDV 748
>Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical
protein F32H2.1a protein.
Length = 944
Score = 27.5 bits (58), Expect = 6.5
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 266 KVTIPLT--SFDEKDIVVKARTGLLMVQAVHKYEGDV 370
K T+P T SFD ++ KAR+GL + A H Y DV
Sbjct: 712 KSTLPPTAASFDLHKMLQKARSGLNRLSAEHFYPLDV 748
>Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical
protein T28F4.4 protein.
Length = 717
Score = 27.5 bits (58), Expect = 6.5
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 5/78 (6%)
Frame = -2
Query: 458 RFLVRP---DCKSNFRSHLRSPAMS*HP--NNSSVHRPRTYEQLAPSEDRSGL*QRCPSH 294
+FL+RP DC ++ R P + S HR Y+ L L C S
Sbjct: 327 QFLIRPDIVDCVVSYLRSTRDPEFRTYRILRRMSTHRTHIYQLLDLQFHVRILTGLCASP 386
Query: 293 QRRLKV*SPCIRCLRCLE 240
R LK C +C +C E
Sbjct: 387 CRMLKYAKSCKQCDKCSE 404
>AF025462-4|AAN72424.1| 123|Caenorhabditis elegans Hypothetical
protein K10F12.4b protein.
Length = 123
Score = 27.1 bits (57), Expect = 8.6
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = -3
Query: 436 VSPTSVHIYAVRQCPNIQIILLYIA 362
++P + +Y++R CP Q +L+Y+A
Sbjct: 94 LTPGNYRLYSMRFCPYAQRVLIYLA 118
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 27.1 bits (57), Expect = 8.6
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = -3
Query: 436 VSPTSVHIYAVRQCPNIQIILLYIA 362
++P + +Y++R CP Q +L+Y+A
Sbjct: 94 LTPGNYRLYSMRFCPYAQRVLIYLA 118
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,728,764
Number of Sequences: 27780
Number of extensions: 263913
Number of successful extensions: 772
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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