Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_G22
         (376 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41264-7|AAA82427.2|  819|Caenorhabditis elegans Hypothetical pr...    41   3e-04
AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical ...    30   0.62 
Z92817-1|CAB07296.1|  367|Caenorhabditis elegans Hypothetical pr...    28   2.5  
AL161712-12|CAC70144.1|  789|Caenorhabditis elegans Hypothetical...    28   2.5  
AF022980-11|AAG24189.1|  330|Caenorhabditis elegans Serpentine r...    28   2.5  
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr...    27   3.3  
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p...    27   3.3  
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr...    27   3.3  

>U41264-7|AAA82427.2|  819|Caenorhabditis elegans Hypothetical
           protein F10E7.4 protein.
          Length = 819

 Score = 41.1 bits (92), Expect = 3e-04
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = +2

Query: 5   GLWSPQNHPERLPEGKXXXXXXXXXXXXGATHPKNFSFWGEGEIASDGFRSLAELGLSGS 184
           G+WS   HP+  P               G++H  N+S W  G I++DG + +AE G +  
Sbjct: 205 GIWSKNTHPKDYP---TLEHLTHFTDMLGSSHSSNYSLWTIGGISTDGMKEIAEWGNTYK 261

Query: 185 LKAGA 199
            +A A
Sbjct: 262 AEAEA 266



 Score = 29.5 bits (63), Expect = 0.82
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +3

Query: 168 WGSVGLLKRELRSPGGLLRSIVKAQGLWHSKVNSNTLACF 287
           WG+    + E ++    +RS++K +GLW   V   T + F
Sbjct: 256 WGNTYKAEAEAKAKASEVRSLMKVKGLWFPDVQGTTKSQF 295


>AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical
           protein F52G3.1 protein.
          Length = 1172

 Score = 29.9 bits (64), Expect = 0.62
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -2

Query: 204 NAAPALRDPLSPNSANDLKPSEAISPSPQKE 112
           N APA+  P  P  ANDL+PS  ++ + +++
Sbjct: 103 NQAPAVPPPPPPQPANDLRPSWLVAANAEQQ 133


>Z92817-1|CAB07296.1|  367|Caenorhabditis elegans Hypothetical
           protein W08G11.1 protein.
          Length = 367

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 248 MAFEG*LEHISLFHWLTGRSLILLLGFFFGTVSEWV 355
           +A+ G  E +S++H + G  L  L GF  G++  WV
Sbjct: 172 LAYPG--ESVSMYHAMKGHRLDGLSGFVVGSMQPWV 205


>AL161712-12|CAC70144.1|  789|Caenorhabditis elegans Hypothetical
           protein Y66D12A.15 protein.
          Length = 789

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -2

Query: 183 DPLSPNSANDLKPSEAISPSPQK--EKFFG 100
           D L+PN   DLKPS  + P  +K   K FG
Sbjct: 307 DTLNPNLGIDLKPSTTLRPYQEKSLRKMFG 336


>AF022980-11|AAG24189.1|  330|Caenorhabditis elegans Serpentine
           receptor, class j protein49 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +2

Query: 284 FHW-LTGRSLILLLGFFFGTVSEWVVGINGLE 376
           FHW LTG ++I++L F+F     W  G   LE
Sbjct: 127 FHWYLTGSAVIIMLYFWFWYFLCWFSGEANLE 158


>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical
           protein ZK524.2d protein.
          Length = 2155

 Score = 27.5 bits (58), Expect = 3.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 207 VNAAPALRDPLSPNSANDLKPSEAISPSPQ 118
           +N  P+L  P+SP    +  P   +SP+PQ
Sbjct: 688 MNPVPSLAVPMSPGPYLNSDPPSPVSPNPQ 717


>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
           protein ZK524.2d protein.
          Length = 2155

 Score = 27.5 bits (58), Expect = 3.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 207 VNAAPALRDPLSPNSANDLKPSEAISPSPQ 118
           +N  P+L  P+SP    +  P   +SP+PQ
Sbjct: 688 MNPVPSLAVPMSPGPYLNSDPPSPVSPNPQ 717


>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical
           protein ZK524.2d protein.
          Length = 2155

 Score = 27.5 bits (58), Expect = 3.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 207 VNAAPALRDPLSPNSANDLKPSEAISPSPQ 118
           +N  P+L  P+SP    +  P   +SP+PQ
Sbjct: 688 MNPVPSLAVPMSPGPYLNSDPPSPVSPNPQ 717


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,932,120
Number of Sequences: 27780
Number of extensions: 177859
Number of successful extensions: 483
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 546325158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)