Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_G22
         (376 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   1.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   1.2  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   1.6  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   3.6  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = +1

Query: 10   MVTAEPPRKTSRRQALLVDSTSLNVIGRYSSKE 108
            ++  EPP+  +  +  +V S S+NV  ++ S++
Sbjct: 902  LLVQEPPQPPNSLETAMVASRSINVKWQHKSQD 934


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = +1

Query: 10  MVTAEPPRKTSRRQALLVDSTSLNVIGRYSSKE 108
           ++  EPP+  +  +  +V S S+NV  ++ S++
Sbjct: 898 LLVQEPPQPPNSLETAMVASRSINVKWQHKSQD 930


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -2

Query: 54  SLPSGSLSGWFCGDH 10
           ++P+GS++ W  G+H
Sbjct: 339 NVPNGSVTNWVSGNH 353


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 28  PRKTSRRQALLVDSTSLNVIGRYSSK 105
           P K      LL  +TSL ++ RY+ K
Sbjct: 702 PSKFCLSVTLLTVATSLVIVSRYAEK 727


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,975
Number of Sequences: 438
Number of extensions: 2060
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9052365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)