Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_G22
         (376 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g39030.1 68417.m05528 enhanced disease susceptibility 5 (EDS5...    29   1.0  
At5g43100.1 68418.m05261 aspartyl protease family protein low si...    27   3.1  
At5g38130.1 68418.m04594 transferase family protein similar to a...    26   7.1  
At2g14540.1 68415.m01628 serpin family protein / serine protease...    26   7.1  
At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C...    26   9.4  
At3g20140.1 68416.m02553 cytochrome P450 family protein contains...    26   9.4  
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro...    26   9.4  

>At4g39030.1 68417.m05528 enhanced disease susceptibility 5 (EDS5) /
           salicylic acid induction deficient 1 (SID1) identical to
           SP|Q945F0; contains Pfam profile PF01554:
           Uncharacterized membrane protein family
          Length = 543

 Score = 29.1 bits (62), Expect = 1.0
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 168 WGSVGLLKRELRSPGGLLRS 227
           WG  GL  R L SPGG+L S
Sbjct: 510 WGRFGLYLRRLLSPGGILNS 529


>At5g43100.1 68418.m05261 aspartyl protease family protein low
           similarity to CND41, chloroplast nucleoid DNA binding
           protein [Nicotiana tabacum] GI:2541876; contains Pfam
           profile PF00026: Eukaryotic aspartyl protease
          Length = 631

 Score = 27.5 bits (58), Expect = 3.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 198 APALRDPLSPNSANDLKPSEAISPSP 121
           +PA   P+S N ++++ PS A S SP
Sbjct: 429 SPAPTSPISQNKSSNISPSPATSESP 454


>At5g38130.1 68418.m04594 transferase family protein similar to
           anthranilate N-hydroxycinnamoyl/benzoyltransferase,
           Dianthus caryophyllus [gi:2239091]; contains Pfam
           transferase family domain PF002458
          Length = 462

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = -2

Query: 363 IPTTHSETVPKKKPSNRIRLLPVNQ*NKLMCSS*PSNAIDLAPLQ 229
           +P    ET+P+ +PS + R+  +++ N L   +  +N ID   L+
Sbjct: 231 VPVLEMETLPRWEPSTKERVFHLSKKNILDLKAKANNEIDTNDLK 275


>At2g14540.1 68415.m01628 serpin family protein / serine protease
           inhibitor family protein similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311; contains Pfam profile
           PF00079: Serpin (serine protease inhibitor)
          Length = 407

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +2

Query: 200 AFTRWIA--SIYCKGARSMAFEG*LEHISLFHWLTGRSL 310
           + T WI   ++Y KGA   AF+  +     FH L G+S+
Sbjct: 190 SLTNWIYGNALYFKGAWEKAFDKSMTRDKPFHLLNGKSV 228


>At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C2H2
           type) family protein identical to superman protein
           GB:S60325 from [Arabidopsis thaliana]; contains Pfam
           domain, PF00096: Zinc finger, C2H2 type
          Length = 204

 Score = 25.8 bits (54), Expect = 9.4
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +3

Query: 33  KDFPKASSLG*-LNFSERHRALLIQRTSPSGEREKSPP 143
           ++F  A +LG  +N   R RA L  + SPS     SPP
Sbjct: 54  REFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPP 91


>At3g20140.1 68416.m02553 cytochrome P450 family protein contains
           Pfam profile: PF00067 cytochrome P450
          Length = 510

 Score = 25.8 bits (54), Expect = 9.4
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -2

Query: 210 LVNAAPALRDPLSPNSANDLKPSEAISPSPQKEKFFG 100
           +VNA   +RDP S    N+ KP   +    + E+  G
Sbjct: 401 VVNAYAMMRDPGSWEDPNEFKPERFLGSGKEDEREHG 437


>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
           protein low similarity to ubiquitin-conjugating
           BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
           ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
           contains Pfam profile PF00179: Ubiquitin-conjugating
           enzyme
          Length = 907

 Score = 25.8 bits (54), Expect = 9.4
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +2

Query: 149 FRSLAELGLSGSLKAGAAFTRWIASIYCKGARSM 250
           +R    +G   +++AG  +  W+ASI  +G R++
Sbjct: 187 WRGTQVMGTVCTVEAGLVYVDWVASIVMEGDRNL 220


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,721,238
Number of Sequences: 28952
Number of extensions: 172926
Number of successful extensions: 434
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 432
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 507810264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)