Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_G15
         (348 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   2.4  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              21   4.2  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   4.2  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          20   9.6  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    20   9.6  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    20   9.6  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      20   9.6  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    20   9.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   9.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   9.6  

>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 133 NLFIDKNGWNKSQDGNRPEW 192
           N+F+DK G++     N  +W
Sbjct: 198 NIFLDKKGFHMDGYTNNSKW 217


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 118 IENNANLFIDKNGWNK 165
           I   A +F+D+NG NK
Sbjct: 84  IREIAEIFLDENGVNK 99


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 162 VPSVLVNK*IRVVFYLP 112
           +P +L+N    +VFY+P
Sbjct: 222 LPCILINSVALLVFYVP 238


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +1

Query: 238 NYNFIAFIFPNQVQFP 285
           N+N+  F+  N + FP
Sbjct: 236 NHNYPPFMLSNSLNFP 251


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 226 PLDNNYNF 249
           PL NNYN+
Sbjct: 87  PLSNNYNY 94


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 162 VPSVLVNK*IRVVFYLP 112
           +P+VL++    +VFYLP
Sbjct: 242 LPTVLISFLCVLVFYLP 258


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +1

Query: 238 NYNFIAFIFPNQVQFP 285
           N+N+  F+  N + FP
Sbjct: 236 NHNYPPFMLSNSLNFP 251


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = -3

Query: 244 YNCCPK 227
           YNCCP+
Sbjct: 211 YNCCPE 216


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = -1

Query: 240 IVVQRVLNSVTILNWDPFGTVPVLRFVPSVLVNK*IRVVFYLPFVSY 100
           +V Q     V ++     G   VLR V    V   +RVV +L   S+
Sbjct: 127 VVAQAYKVDVEVIGGASRGCTAVLRCVVPSFVKDLVRVVSWLQEPSF 173


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = -1

Query: 240 IVVQRVLNSVTILNWDPFGTVPVLRFVPSVLVNK*IRVVFYLPFVSY 100
           +V Q     V ++     G   VLR V    V   +RVV +L   S+
Sbjct: 127 VVAQAYKVDVEVIGGASRGCTAVLRCVVPSFVKDLVRVVSWLQEPSF 173


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,341
Number of Sequences: 438
Number of extensions: 2593
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7936320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)