Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_G15
(348 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g60140.1 68416.m06715 glycosyl hydrolase family 1 protein con... 33 0.040
At2g27570.1 68415.m03340 sulfotransferase family protein similar... 27 2.6
At5g60970.1 68418.m07648 TCP family transcription factor, putati... 27 3.4
At5g14950.1 68418.m01754 glycosyl hydrolase family 38 protein si... 27 3.4
At2g44460.1 68415.m05528 glycosyl hydrolase family 1 protein con... 27 3.4
At5g35750.1 68418.m04281 histidine kinase (AHK2) identical to hi... 26 6.0
At2g44470.1 68415.m05529 glycosyl hydrolase family 1 protein con... 26 6.0
At3g22180.1 68416.m02799 zinc finger (DHHC type) family protein ... 26 7.9
At1g10920.1 68414.m01254 disease resistance protein (CC-NBS-LRR ... 26 7.9
>At3g60140.1 68416.m06715 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to Cyanogenic Beta-Glucosidase
(GI:1311386)(pdb:1CBG) [Trifolium Repens]; identical
beta-glucosidase GI:10834547
Length = 577
Score = 33.5 bits (73), Expect = 0.040
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +1
Query: 100 IRYKRQIENNANLFIDKNGWNKSQDGNRPEWIPIQNGYRIQY 225
+ Y ++ NN ++I +NG N + DG +P +++ +RI+Y
Sbjct: 394 LNYIKERYNNMPVYIKENGINDNDDGTKPREEIVKDTFRIEY 435
>At2g27570.1 68415.m03340 sulfotransferase family protein similar to
steroid sulfotransferase from [Brassica napus]
GI:3420008, GI:3420006; contains Pfam profile PF00685:
Sulfotransferase domain
Length = 273
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 194 IHSGRFPS*DLFHPFLSINKFALFS 120
+H + PS D HP LS N LFS
Sbjct: 88 VHRSKHPSHDHHHPLLSNNPHVLFS 112
>At5g60970.1 68418.m07648 TCP family transcription factor, putative
putative basic helix-loop-helix DNA binding protein
TCP2, Arabidopsis thaliana, EMBL:AF072691
Length = 360
Score = 27.1 bits (57), Expect = 3.4
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +1
Query: 142 IDKNGWNKSQDGNRPEWIPIQNGYRIQYPLDNNYN 246
+DK W K+ + + + ++ Q+PL N YN
Sbjct: 192 LDKGKWIKNDENSNQDHQGFNTNHQQQFPLTNPYN 226
>At5g14950.1 68418.m01754 glycosyl hydrolase family 38 protein similar
to alpha-mannosidase II SP:P27046 from [Mus musculus]
Length = 1173
Score = 27.1 bits (57), Expect = 3.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 100 IRYKRQIENNANLFIDKNGWNKSQDGNRPEWIPIQNGYRIQYPL 231
+RYK ++N + D NG+ S+ + IP+Q Y YP+
Sbjct: 883 VRYKTDVDNKKVFYSDLNGFQMSRRETYDK-IPLQGNY---YPM 922
>At2g44460.1 68415.m05528 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to beta-glucosidase 1 (GI:12043529) [Arabidopsis
thaliana]
Length = 582
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 100 IRYKRQIENNANLFIDKNGWNKSQDGNRPEWIPIQNGYRIQYPLDN 237
+ Y + NN ++I +NG N DG + + + +RI Y D+
Sbjct: 396 LNYIKDKYNNPIVYIKENGINDYDDGTKSREEILNDTFRISYHEDH 441
>At5g35750.1 68418.m04281 histidine kinase (AHK2) identical to
histidine kinase AHK2 [Arabidopsis thaliana]
gi|13537196|dbj|BAB40774
Length = 1176
Score = 26.2 bits (55), Expect = 6.0
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 115 QIENNANLFIDKNGWNKSQ 171
++EN A + IDK+ WNK +
Sbjct: 932 KLENLAMILIDKDAWNKEE 950
>At2g44470.1 68415.m05529 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to anther-specific protein ATA27 (GI:2746341)
[Arabidopsis thaliana]
Length = 451
Score = 26.2 bits (55), Expect = 6.0
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +1
Query: 100 IRYKRQIENNANLFIDKNGWNKSQDGNRPEWIPIQNGYRIQYPLDN 237
+ Y + NN +++ +NG + DG + +++ +RI Y D+
Sbjct: 397 LNYIKDKYNNPIVYVKENGIDHYDDGTKSRETILKDTFRISYHQDH 442
>At3g22180.1 68416.m02799 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 706
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 214 GNHSELGSIRDGSRPEICSIRSC 146
GN S GS+ D R E S RSC
Sbjct: 117 GNSSVKGSVEDAQRVESVSRRSC 139
>At1g10920.1 68414.m01254 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 727
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 200 IGIHSGRFPS*DLFHPFLS 144
+ IH RFP LFHP LS
Sbjct: 635 LAIHMPRFPDQYLFHPHLS 653
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,714,604
Number of Sequences: 28952
Number of extensions: 156437
Number of successful extensions: 389
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 389
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 429398688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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