Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_G13
(632 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 219 1e-57
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 215 2e-56
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 210 5e-55
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554... 201 4e-52
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 107 7e-24
03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026 63 2e-10
11_06_0110 + 20212221-20214011,20214072-20214368 29 3.1
06_03_1219 - 28491185-28494415 29 3.1
03_02_0389 - 8036575-8036841,8037011-8037133,8037516-8037736,803... 28 7.1
08_02_1620 - 28288152-28288353,28288469-28288557,28288634-282888... 27 9.4
04_03_0051 + 10199702-10199839,10199869-10200642,10202481-102030... 27 9.4
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 219 bits (536), Expect = 1e-57
Identities = 104/179 (58%), Positives = 131/179 (73%), Gaps = 2/179 (1%)
Frame = +3
Query: 93 EVFFEEKFSDDSWESNWVYSEHPGKE--FGKFKLTAGKFYNDAEADKGLQTSEDARFYAL 266
EVFF+EKF +D WES WV SE E G++ T+GK+ D E DKG+QTSED RFYA+
Sbjct: 30 EVFFQEKF-EDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPE-DKGIQTSEDYRFYAI 87
Query: 267 SRKFKPFSNEGKPLVVQFSVKHEQDIDCGGGYLKVFDCRLDQKDMHGETPYEIMFGPDIC 446
S ++ FSN+ K LV+QFSVKHEQ +DCGGGY+K+ +DQK G+TPY IMFGPDIC
Sbjct: 88 SAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYSIMFGPDIC 147
Query: 447 GPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGEL 623
G TKKVH IF+ KNHLIKKD+ C+ D +H+YTLI+ PD TY +LIDN + +SG +
Sbjct: 148 GYSTKKVHTIFTKNDKNHLIKKDVPCETDQLSHVYTLIIHPDATYTILIDNVEKQSGSI 206
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 215 bits (525), Expect = 2e-56
Identities = 109/218 (50%), Positives = 139/218 (63%), Gaps = 13/218 (5%)
Frame = +3
Query: 18 LAVN*KMKSAVXXXXXXXXXXXXNCEVFFEEKFSDDSWESNWVYSE--HPGKEFGKFKLT 191
+A+ + +AV EVFF+EKF DD WE WV SE G++ T
Sbjct: 1 MAIPRRSAAAVAAVVALASVAAVAGEVFFQEKF-DDGWEDRWVKSEWKKDDNRAGEWNHT 59
Query: 192 AGKFYNDAEADKGL-----------QTSEDARFYALSRKFKPFSNEGKPLVVQFSVKHEQ 338
+GK+Y DA+ DKG+ QTSED RFYA+S K+ FS++ K LV+QFSVKHEQ
Sbjct: 60 SGKWYGDAD-DKGMCEVTLLLCAGIQTSEDYRFYAISAKYPEFSSKDKTLVLQFSVKHEQ 118
Query: 339 DIDCGGGYLKVFDCRLDQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDI 518
+DCGGGY+K+ +DQK GETPY IMFGPDICG TKKVH I + GKNHLIKKD+
Sbjct: 119 KLDCGGGYVKLLGGDVDQKKFGGETPYSIMFGPDICGYATKKVHAILTKNGKNHLIKKDV 178
Query: 519 RCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGELEAD 632
CK D TH+YTLI++PD Y +LIDN + ++G + D
Sbjct: 179 PCKTDQLTHVYTLIIRPDAKYSILIDNTEKQTGSIYDD 216
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 210 bits (514), Expect = 5e-55
Identities = 95/182 (52%), Positives = 133/182 (73%), Gaps = 2/182 (1%)
Frame = +3
Query: 93 EVFFEEKFSDDSWESNWVYSEHPGKE--FGKFKLTAGKFYNDAEADKGLQTSEDARFYAL 266
EV FEE+F +D WES WV S+ E G FK TAG++ D + DKG+QT+ DAR +A+
Sbjct: 28 EVIFEERF-EDGWESRWVKSDWKRSEGKAGTFKHTAGRYSGDPD-DKGIQTTLDARHFAI 85
Query: 267 SRKFKPFSNEGKPLVVQFSVKHEQDIDCGGGYLKVFDCRLDQKDMHGETPYEIMFGPDIC 446
S K FSN+G+ LV+Q+S+K EQDI+CGGGY+K+ ++QK G+TPY +MFGPDIC
Sbjct: 86 SAKIPEFSNKGRTLVLQYSIKFEQDIECGGGYIKLMSGYVNQKKFSGDTPYSLMFGPDIC 145
Query: 447 GPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGELE 626
G TKK+H+I SY+G+N+ IKKD++C+ D TH+YT I++PD +Y +L+DN + ESG +
Sbjct: 146 GTQTKKLHLILSYQGQNYPIKKDLQCETDKLTHVYTFILRPDASYSILVDNRERESGSMY 205
Query: 627 AD 632
D
Sbjct: 206 TD 207
>05_06_0014 +
24854462-24854570,24854958-24855065,24855240-24855432,
24855892-24856150,24856236-24856292,24856370-24856417,
24856725-24856811,24856885-24856942,24857084-24857151,
24857279-24857374,24857483-24857539,24857906-24857952,
24858184-24858210,24858312-24858504
Length = 468
Score = 201 bits (490), Expect = 4e-52
Identities = 92/182 (50%), Positives = 127/182 (69%), Gaps = 2/182 (1%)
Frame = +3
Query: 93 EVFFEEKFSDDSWESNWVYSEHPGKE--FGKFKLTAGKFYNDAEADKGLQTSEDARFYAL 266
EV FEE+F DD W S WV S+ E G FK TAG + D + D+G+QT+ DA+ +A+
Sbjct: 28 EVIFEERFDDD-WGSRWVKSDWKKSEGKAGTFKHTAGSYSGDPD-DRGIQTTSDAKHFAI 85
Query: 267 SRKFKPFSNEGKPLVVQFSVKHEQDIDCGGGYLKVFDCRLDQKDMHGETPYEIMFGPDIC 446
S KF FSN+ + LVVQ+S+K EQDI+CGG Y+K+ ++QK G+TPY MFGPDIC
Sbjct: 86 SAKFPEFSNKNRTLVVQYSIKIEQDIECGGAYIKLMSGYVNQKKFGGDTPYSFMFGPDIC 145
Query: 447 GPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGELE 626
G TKK+H+I SY+G+N+ IKKD++C+ D TH YT I++PD +Y +L+DN + E G +
Sbjct: 146 GDQTKKLHLILSYQGQNYPIKKDLKCETDKLTHFYTFILRPDASYSLLVDNREREFGSMY 205
Query: 627 AD 632
D
Sbjct: 206 TD 207
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 107 bits (257), Expect = 7e-24
Identities = 74/188 (39%), Positives = 101/188 (53%), Gaps = 11/188 (5%)
Frame = +3
Query: 102 FEEKFSDDSWESNWVYSEHPGKEFGKFKLTAGKFYNDAEADKGLQTSEDARFYALSRKF- 278
F E F D+S+E WV S GK+ K K +D D GL SE A+ YA+ ++
Sbjct: 27 FYEPF-DESFEGRWVLS---GKDDYKGVWKHEK--SDGHEDYGLLVSEKAKKYAIIKELD 80
Query: 279 KPFSNEGKPLVVQFSVKHEQDIDCGGGYLKVF---DCRLDQKDMHGETPYEIMFGPDICG 449
+P + + +V+QF V+ + ++CGG YLK D D K+ ETPY IMFGPD CG
Sbjct: 81 EPVTLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKEFDNETPYTIMFGPDKCG 140
Query: 450 PGTKKVHVIFSYK----GK--NHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLID-NEKV 608
T KVH I +K GK H +K D +H+YT I+KPDN +L+D EK
Sbjct: 141 -STNKVHFILKHKNPKTGKYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDGEEKK 199
Query: 609 ESGELEAD 632
++ L AD
Sbjct: 200 KANFLSAD 207
>03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026
Length = 585
Score = 63.3 bits (147), Expect = 2e-10
Identities = 25/48 (52%), Positives = 34/48 (70%)
Frame = +3
Query: 489 GKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGELEAD 632
G NHLIKKD+ C+ D TH+YTLI++PD Y +LIDN + +G + D
Sbjct: 515 GNNHLIKKDVPCETDQLTHVYTLIIRPDAKYSILIDNTEKRTGSIYGD 562
>11_06_0110 + 20212221-20214011,20214072-20214368
Length = 695
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = -2
Query: 349 QSMSCSCFTLNCT--TKGLPSLLNGLNFLDRA*NLASSDVCKPLSASASL*NFPAVNLNL 176
++MS L+C +P + L LD + NL S DV + + L N L
Sbjct: 526 ENMSLEKLYLDCNHIADRIPRMPRNLMLLDISYNLISGDVPQSICELQKLNGLDLSNNLL 585
Query: 175 PNSFPGCSLYTQ 140
FP CSL ++
Sbjct: 586 EGEFPQCSLMSR 597
>06_03_1219 - 28491185-28494415
Length = 1076
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 160 GCSLYTQFDSHESSENFSSKNTSQFIDEIANKLAIAST 47
G SL+ S ++N SSK+T F+ E+A + A A T
Sbjct: 741 GASLFDSMSSELYNDNDSSKDTIFFMSEVAGEAAKAVT 778
>03_02_0389 -
8036575-8036841,8037011-8037133,8037516-8037736,
8037788-8037812,8038344-8038445,8038556-8038951,
8039647-8039699,8039813-8039897,8040220-8040370,
8040457-8040464
Length = 476
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 186 LTAGKFYNDAEADKGLQTSEDARFYALSRKFK-PFSNEGKPLVVQFSV 326
L AG + + GL S ARFYA+ R + S++ VQFSV
Sbjct: 12 LVAGGYLVLERPNAGLVLSTSARFYAIVRPLRDELSHDSWAWAVQFSV 59
>08_02_1620 - 28288152-28288353,28288469-28288557,28288634-28288828,
28289082-28289423,28290227-28291672,28292590-28292666,
28293160-28294509,28295921-28296029,28296896-28297007,
28297800-28297957
Length = 1359
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = -2
Query: 253 LASSDVCKPLSASASL*NFPAVNLNLPNSFPGCS--LYTQF-DSHESSENFSSKNTSQF 86
+A S K + ASA + + + +P S+P CS L +F D +S++ S+K S+F
Sbjct: 1248 VAVSPSLKSMFASAQMSPILPLRVLVPASYPKCSPVLLDKFPDEQRNSDDLSTKARSKF 1306
>04_03_0051 +
10199702-10199839,10199869-10200642,10202481-10203077,
10237046-10237159
Length = 540
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 183 KLTAGKFYNDAEADKGLQTSEDARFYALSRKF 278
++ AGK Y E D +T E ARF + R++
Sbjct: 187 RMVAGKQYYGGEGDAEAETEEAARFREMVREY 218
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,185,672
Number of Sequences: 37544
Number of extensions: 367819
Number of successful extensions: 1052
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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