Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_G13
(632 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.35
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.35
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.35
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.35
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.35
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.35
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 26 0.35
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 26 0.35
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 25 0.46
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 25 0.46
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 22 4.3
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 7.5
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 21 9.9
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 21 9.9
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.35
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 279 KPFSNEGKPLVVQFSVKHEQDID 347
+P +NE +PL V+F + +Q ID
Sbjct: 3 RPVANESEPLEVKFGITLQQIID 25
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.35
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 279 KPFSNEGKPLVVQFSVKHEQDID 347
+P +NE +PL V+F + +Q ID
Sbjct: 3 RPVANESEPLEVKFGITLQQIID 25
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.35
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 279 KPFSNEGKPLVVQFSVKHEQDID 347
+P +NE +PL V+F + +Q ID
Sbjct: 3 RPVANESEPLEVKFGITLQQIID 25
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.35
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 279 KPFSNEGKPLVVQFSVKHEQDID 347
+P +NE +PL V+F + +Q ID
Sbjct: 3 RPVANESEPLEVKFGITLQQIID 25
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.35
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 279 KPFSNEGKPLVVQFSVKHEQDID 347
+P +NE +PL V+F + +Q ID
Sbjct: 3 RPVANESEPLEVKFGITLQQIID 25
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.35
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 279 KPFSNEGKPLVVQFSVKHEQDID 347
+P +NE +PL V+F + +Q ID
Sbjct: 3 RPVANESEPLEVKFGITLQQIID 25
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.8 bits (54), Expect = 0.35
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 279 KPFSNEGKPLVVQFSVKHEQDID 347
+P +NE +PL V+F + +Q ID
Sbjct: 71 RPVANESEPLEVKFGITLQQIID 93
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.8 bits (54), Expect = 0.35
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 279 KPFSNEGKPLVVQFSVKHEQDID 347
+P +NE +PL V+F + +Q ID
Sbjct: 71 RPVANESEPLEVKFGITLQQIID 93
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 25.4 bits (53), Expect = 0.46
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 537 YTHLYTLIVKPDNTYEVLIDNEKVES 614
Y H Y + KP N E++ N K+ES
Sbjct: 428 YYHSYKMHQKPYNKDEIIYPNLKIES 453
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 25.4 bits (53), Expect = 0.46
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 537 YTHLYTLIVKPDNTYEVLIDNEKVES 614
Y H Y + KP N E++ N K+ES
Sbjct: 428 YYHSYKMHQKPYNKDEIIYPNLKIES 453
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 320 ELYHQRFALIAEW 282
ELYH +F + EW
Sbjct: 62 ELYHHKFFQVHEW 74
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 7.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 220 RIKVYRHLKTRGSTPYRGNSSHSAMRA 300
RIK L T +T ++ N SH R+
Sbjct: 676 RIKTTEKLSTDPNTHFQVNQSHGIKRS 702
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 21.0 bits (42), Expect = 9.9
Identities = 7/26 (26%), Positives = 15/26 (57%)
Frame = +3
Query: 468 HVIFSYKGKNHLIKKDIRCKDDVYTH 545
H+++ ++G ++ KD R + Y H
Sbjct: 213 HLVYPFEGDIRIVNKDRRGELFYYMH 238
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 21.0 bits (42), Expect = 9.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 629 GF*FTRFNLLIVDEDLVSVIRFHDES 552
GF TR+++ DL+++ FHD S
Sbjct: 161 GFLRTRWSISGTVFDLINIHLFHDAS 186
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,308
Number of Sequences: 438
Number of extensions: 3797
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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