Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_G12
         (425 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   0.93 
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   5.0  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   5.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   6.6  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    20   8.7  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    20   8.7  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.4 bits (48), Expect = 0.93
 Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
 Frame = +1

Query: 97  PTGAPPSACFDMIPGHAADVQTVPAPYTITT-AVSSVKAGHSIDVVISGKTPEDKMAGIL 273
           P  AP SA   +           P P T ++ + +SV +  S  + I  K       G++
Sbjct: 11  PPPAPQSAATPISSSGMTSPAAAPPPATTSSGSPASVASNASAPLHIPAKRAAYDCEGVI 70

Query: 274 LEARQGDKIVGTWTVSPDDTFSQ 342
                     G W  SPD+ F Q
Sbjct: 71  RHH-------GQWNYSPDNHFEQ 86


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 391 HASCGSRRYLVH 356
           HA+CG++  L+H
Sbjct: 357 HATCGTKNALLH 368


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +2

Query: 77  WRLPALTPPEHRLARAST*SQGTLLMFRQYQRLT 178
           W L +  PP ++++   T SQ    +++    LT
Sbjct: 324 WSLTSSPPPPYQISAQPTPSQSPNQIYQPVTNLT 357


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -2

Query: 307 CRRSCHPDELPGGCR 263
           C R C  D +P  CR
Sbjct: 44  CARKCVKDSVPMTCR 58


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 419 ETVCLSNSLACILWVTALF 363
           E VC S S+  ++W++ +F
Sbjct: 232 EEVCDSFSIFGLVWISLIF 250


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 419 ETVCLSNSLACILWVTALF 363
           E VC S S+  ++W++ +F
Sbjct: 232 EEVCDSFSIFGLVWISLIF 250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,885
Number of Sequences: 336
Number of extensions: 2391
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)