Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_G11
(294 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 30 0.005
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 1.8
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 1.8
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 1.8
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 1.8
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 3.1
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 21 3.1
DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein ... 20 5.5
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 20 5.5
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 20 5.5
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 20 7.3
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 20 7.3
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 19 9.6
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 30.3 bits (65), Expect = 0.005
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +2
Query: 80 TKDCAHPVVTAPIEKTIPHPDY--IPNDVQGRHDIALIRLMVTAPYTDFVRPICLP 241
+K + V I K I HP Y I D +DIAL++ + D V P CLP
Sbjct: 224 SKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPACLP 279
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 1.8
Identities = 7/27 (25%), Positives = 14/27 (51%)
Frame = +2
Query: 140 DYIPNDVQGRHDIALIRLMVTAPYTDF 220
D++PN +H+ + L PY ++
Sbjct: 119 DFVPNHTSDQHEWFQLSLKNIEPYNNY 145
Score = 20.2 bits (40), Expect = 5.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 137 PDYIPNDVQGRHD 175
P IPN V G HD
Sbjct: 336 PSGIPNWVPGNHD 348
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.8 bits (44), Expect = 1.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 102 TGCAQSLVPFMQSGP 58
+GC Q LVP +Q P
Sbjct: 293 SGCLQFLVPMLQGFP 307
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.8 bits (44), Expect = 1.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 102 TGCAQSLVPFMQSGP 58
+GC Q LVP +Q P
Sbjct: 261 SGCLQFLVPMLQGFP 275
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 1.8
Identities = 7/27 (25%), Positives = 14/27 (51%)
Frame = +2
Query: 140 DYIPNDVQGRHDIALIRLMVTAPYTDF 220
D++PN +H+ + L PY ++
Sbjct: 119 DFVPNHTSDQHEWFQLSLKNIEPYNNY 145
Score = 20.2 bits (40), Expect = 5.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 137 PDYIPNDVQGRHD 175
P IPN V G HD
Sbjct: 336 PSGIPNWVPGNHD 348
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.0 bits (42), Expect = 3.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 63 GPLFVVLYSPKRTFFGVPSI 4
GPLF +Y+ + FG SI
Sbjct: 121 GPLFCQIYAMLGSLFGCGSI 140
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 21.0 bits (42), Expect = 3.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 63 GPLFVVLYSPKRTFFGVPSI 4
GPLF +Y+ + FG SI
Sbjct: 87 GPLFCQIYAMLGSLFGCGSI 106
>DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein 5
protein.
Length = 104
Score = 20.2 bits (40), Expect = 5.5
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 99 GCAQSLVPFMQ 67
G A +L+PFMQ
Sbjct: 74 GIANTLIPFMQ 84
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.2 bits (40), Expect = 5.5
Identities = 8/39 (20%), Positives = 16/39 (41%)
Frame = -3
Query: 193 QPNKRNVMSALHIVGDVIWMWNSFFYRSSNNGMCTVFGT 77
+P + + LH+ D IW + Y +++ T
Sbjct: 93 EPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLAT 131
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 20.2 bits (40), Expect = 5.5
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = +3
Query: 210 IQILYGPSVYRLWII 254
+Q+ Y PS+ ++WI+
Sbjct: 593 VQLWYVPSLDQVWIL 607
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 19.8 bits (39), Expect = 7.3
Identities = 7/30 (23%), Positives = 15/30 (50%)
Frame = -3
Query: 193 QPNKRNVMSALHIVGDVIWMWNSFFYRSSN 104
+P + + LH+ D IW + Y +++
Sbjct: 93 EPKEYGGVKMLHVPSDHIWRPDIVLYNNAD 122
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 19.8 bits (39), Expect = 7.3
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 68 SPDHCLLYYTLLNAHSS 18
+PD CL Y T +SS
Sbjct: 332 TPDQCLFYNTDFIIYSS 348
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 19.4 bits (38), Expect = 9.6
Identities = 8/38 (21%), Positives = 15/38 (39%)
Frame = -3
Query: 190 PNKRNVMSALHIVGDVIWMWNSFFYRSSNNGMCTVFGT 77
P + + LH+ D IW + Y +++ T
Sbjct: 90 PKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLAT 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,837
Number of Sequences: 438
Number of extensions: 2171
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 5994288
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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