Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_G04
         (555 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    27   0.41 
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   6.7  
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            23   8.9  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   8.9  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 27.1 bits (57), Expect = 0.41
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +2

Query: 326 PLRRRSAQRRAATWPSSIVKQKPR 397
           P RRRS   R  +WP S    KP+
Sbjct: 275 PARRRSRSTRPTSWPRSRPTSKPK 298


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 307 SVGRPYSVAAAICSAEGG 360
           SVG P S AAA+ SA  G
Sbjct: 231 SVGGPSSAAAAMLSASSG 248


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 455 TSNETVRV*AGCCA 414
           T NET R  +GCCA
Sbjct: 200 TQNETNRQNSGCCA 213


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 19  TGIHATVSDGDFNS 60
           TGIH  V  GDFN+
Sbjct: 109 TGIHKFVIGGDFNA 122


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,973
Number of Sequences: 2352
Number of extensions: 12008
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)