SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_G04
         (555 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061485-1|AAL29033.1|  867|Drosophila melanogaster LD45056p pro...    30   1.8  
AE014134-359|AAF51288.2|  867|Drosophila melanogaster CG7074-PA ...    30   1.8  
DQ016302-1|AAY34943.1|  265|Drosophila melanogaster lectin type ...    28   7.4  
AE014134-1355|AAF52570.1|  229|Drosophila melanogaster CG7106-PA...    28   7.4  
AE014134-2008|AAF53047.1|  118|Drosophila melanogaster CG16834-P...    28   9.7  

>AY061485-1|AAL29033.1|  867|Drosophila melanogaster LD45056p
           protein.
          Length = 867

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = +1

Query: 184 NEPYPYICYRNHTKDLVMTECGTTDKEYKMDQRTNKCYKSHSVGRPYSVAAAIC 345
           N     ICYR+  +DL +  CG    E ++D+  ++ Y      + YS AA IC
Sbjct: 483 NNSNKLICYRSEQRDLALQLCGWA-FEQELDRFIDQLY----ANKEYSRAAMIC 531


>AE014134-359|AAF51288.2|  867|Drosophila melanogaster CG7074-PA
           protein.
          Length = 867

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = +1

Query: 184 NEPYPYICYRNHTKDLVMTECGTTDKEYKMDQRTNKCYKSHSVGRPYSVAAAIC 345
           N     ICYR+  +DL +  CG    E ++D+  ++ Y      + YS AA IC
Sbjct: 483 NNSNKLICYRSEQRDLALQLCGWA-FEQELDRFIDQLY----ANKEYSRAAMIC 531


>DQ016302-1|AAY34943.1|  265|Drosophila melanogaster lectin type C
           protein.
          Length = 265

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 12/42 (28%), Positives = 17/42 (40%)
 Frame = +1

Query: 91  IKWMPGXXXXXXXXXXCIVYHGEGLVEDVNCNEPYPYICYRN 216
           +KW PG          C+  H  G+    +C   + YIC  N
Sbjct: 222 LKWNPGEPLYEHVDQRCVSIHNGGMWV-ASCTSDFKYICEAN 262


>AE014134-1355|AAF52570.1|  229|Drosophila melanogaster CG7106-PA
           protein.
          Length = 229

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 12/42 (28%), Positives = 17/42 (40%)
 Frame = +1

Query: 91  IKWMPGXXXXXXXXXXCIVYHGEGLVEDVNCNEPYPYICYRN 216
           +KW PG          C+  H  G+    +C   + YIC  N
Sbjct: 186 LKWNPGEPLYEHVDQRCVSIHNGGMWV-ASCTSDFKYICEAN 226


>AE014134-2008|AAF53047.1|  118|Drosophila melanogaster CG16834-PA
           protein.
          Length = 118

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
 Frame = +1

Query: 91  IKWMPGXXXXXXXXXXCIV---YHGEGLVEDVNCNEPYPYICYRNHTKD 228
           + W+P           C+    Y+G     D+ C   +PY+C R   +D
Sbjct: 56  LNWVPLEPNNASPEEDCVGFANYNGAFGYHDIECKVQFPYVCQREPAED 104


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,453,303
Number of Sequences: 53049
Number of extensions: 526875
Number of successful extensions: 1366
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1366
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -