Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_F24
         (541 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin pro...    83   2e-16
AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin (...    83   2e-16
Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical pr...    32   0.30 
AF038609-2|AAK29794.1|  226|Caenorhabditis elegans Hypothetical ...    29   2.1  
Z82083-6|CAB04974.1|  388|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AF038609-1|AAO61425.1|  234|Caenorhabditis elegans Hypothetical ...    27   8.6  

>L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin
           protein.
          Length = 264

 Score = 82.6 bits (195), Expect = 2e-16
 Identities = 34/64 (53%), Positives = 46/64 (71%)
 Frame = +1

Query: 1   LDAHDNDRFVSRHELFPIRAPLMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQLDEYEL 180
           LD   +D+ VS HEL PI AP++ +E CI PFL+ CDA+ D  I++ EWGKCL L E E+
Sbjct: 201 LDTKPHDKSVSHHELIPITAPVIPMESCIKPFLEGCDANNDGNISIKEWGKCLGLKEGEI 260

Query: 181 EDRC 192
           ++RC
Sbjct: 261 QERC 264


>AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin
           (sparc) related protein1 protein.
          Length = 264

 Score = 82.6 bits (195), Expect = 2e-16
 Identities = 34/64 (53%), Positives = 46/64 (71%)
 Frame = +1

Query: 1   LDAHDNDRFVSRHELFPIRAPLMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQLDEYEL 180
           LD   +D+ VS HEL PI AP++ +E CI PFL+ CDA+ D  I++ EWGKCL L E E+
Sbjct: 201 LDTKPHDKSVSHHELIPITAPVIPMESCIKPFLEGCDANNDGNISIKEWGKCLGLKEGEI 260

Query: 181 EDRC 192
           ++RC
Sbjct: 261 QERC 264


>Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical
           protein T04F3.2 protein.
          Length = 260

 Score = 31.9 bits (69), Expect = 0.30
 Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = +1

Query: 13  DNDRFVSRHELFPIRAPLM---SLEHCIAPFLDQCDADEDHRITLAEWGKCL 159
           +++  + R E  P ++ L+   ++  C       CD ++D ++T  EW KC+
Sbjct: 184 NHNNVLERSEWKPFKSVLLEWKNVRQCSRNLFKTCDLNKDRKLTFDEWRKCI 235


>AF038609-2|AAK29794.1|  226|Caenorhabditis elegans Hypothetical
           protein C54E4.2a protein.
          Length = 226

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
 Frame = +1

Query: 13  DNDRFVSRHELFPIRAPLMSLEHCIAPFLDQC-DADEDHRITLAEWGKCLQL-DEYELED 186
           + D  +S+ EL PI       E C+  F+D C D   D  I++ EW  C    D+   E 
Sbjct: 91  NQDGKLSKAELRPIERG--GNEACVEEFIDMCDDMVVDGSISVDEWCDCFTFSDDLRHEP 148

Query: 187 RCDEFIDDL 213
            C +   D+
Sbjct: 149 PCHKAKHDV 157


>Z82083-6|CAB04974.1|  388|Caenorhabditis elegans Hypothetical
           protein ZK1010.8 protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -1

Query: 307 NSKSKLQSHVIKSEWRYVEPNIIVEFSKHHATSHR*IRRSGPP 179
           +S+ + ++HV K    Y++PN      KHH  SH   R   PP
Sbjct: 184 HSRRRRRNHVSKI---YLDPNDARRHQKHHHRSHSYSRPVAPP 223


>AF038609-1|AAO61425.1|  234|Caenorhabditis elegans Hypothetical
           protein C54E4.2b protein.
          Length = 234

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
 Frame = +1

Query: 76  EHCIAPFLDQC-DADEDHRITLAEWGKCLQL-DEYELEDRCDEFIDDL 213
           E C+  F+D C D   D  I++ EW  C    D+   E  C +   D+
Sbjct: 118 EACVEEFIDMCDDMVVDGSISVDEWCDCFTFSDDLRHEPPCHKAKHDV 165


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,966,199
Number of Sequences: 27780
Number of extensions: 207889
Number of successful extensions: 498
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)