Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_F23
(379 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36805| Best HMM Match : GED (HMM E-Value=0.24) 31 0.23
SB_20454| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.72
SB_56913| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_10875| Best HMM Match : TIL (HMM E-Value=6.8) 28 2.9
SB_54209| Best HMM Match : Baculo_11_kDa (HMM E-Value=8) 27 3.8
SB_1398| Best HMM Match : fn3 (HMM E-Value=0.0034) 27 5.1
SB_29641| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_28178| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_20011| Best HMM Match : GED (HMM E-Value=0.65) 27 6.7
SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30) 27 6.7
SB_28721| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_13243| Best HMM Match : COX17 (HMM E-Value=1.7) 26 8.8
SB_9137| Best HMM Match : SCP (HMM E-Value=3.6e-18) 26 8.8
SB_13944| Best HMM Match : Citrate_synt (HMM E-Value=0) 26 8.8
SB_5363| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
>SB_36805| Best HMM Match : GED (HMM E-Value=0.24)
Length = 377
Score = 31.5 bits (68), Expect = 0.23
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 140 SKDVDQVNVDDEYYKIGKDYDVEANIDNYTNKKAVEEFLKLYRIGYLPKYY 292
S+ V QV + ++ K G+ +D +I+N ++K V +LK Y KYY
Sbjct: 48 SEGVGQVVIHRKFMKPGELFDFPVSIENGKSRKFVSNWLKKYPWLAYSKYY 98
>SB_20454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 693
Score = 29.9 bits (64), Expect = 0.72
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +2
Query: 50 QCGVTENVSLQDKRCRRSVCGAPEKGFI--XFSKDVDQVNVDDEYYKIGKDYD--VEANI 217
+CGVT++ ++ D + +R+ G P F+ FS + D+ + +G D NI
Sbjct: 521 RCGVTDSPTVPDDKGKRNAKGRPMSMFVGSFFSANKDKQQSINNNNNVGDDSGGFPALNI 580
Query: 218 DNYTNKKAVEE-FLKLYRIGYLPKYYEFS 301
KK+++ + G+LP+ +F+
Sbjct: 581 GPCLEKKSIKRAYSDGLSSGFLPQTLDFA 609
>SB_56913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1603
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +2
Query: 53 CGVTENVSLQDKRCRRSVCGAPEKGFIXFSKDVDQVNVDDEYYKIGKDYDV 205
C EN KR +S + + F +D+D + DDE+ + D+ V
Sbjct: 1211 CSYVENGPETSKREAKSTAPSASQAAKDFDEDIDAICSDDEFSFVDDDHKV 1261
>SB_10875| Best HMM Match : TIL (HMM E-Value=6.8)
Length = 62
Score = 27.9 bits (59), Expect = 2.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 50 QCGVTENVSLQDKRCRRSVCG 112
+C + +NV D+ CRRS CG
Sbjct: 29 KCHMEKNVIFDDRACRRSRCG 49
>SB_54209| Best HMM Match : Baculo_11_kDa (HMM E-Value=8)
Length = 337
Score = 27.5 bits (58), Expect = 3.8
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = +2
Query: 92 CRRSVCGAPEKGFIXFSKDV-----DQVNVDDEYYKIGKDYDVEANIDNYTNKKAVEEFL 256
CR C + G + F K D++ + +K G+ +D +I+N ++K V +L
Sbjct: 7 CRTEDCSPYDIGLV-FDKIASYSPQDKLKFIENVWKPGELFDFRVSIENGKSRKFVLNWL 65
Query: 257 KLYRIGYLPKYY 292
K Y KYY
Sbjct: 66 KKYPWLAYSKYY 77
>SB_1398| Best HMM Match : fn3 (HMM E-Value=0.0034)
Length = 2245
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +1
Query: 43 CNPVWCHRKRITSRQKMSTQCLWSARKRFYXLFQRC 150
C P WC K +K + WSAR LF C
Sbjct: 478 CKPWWCSIKIEWCSKKTFKEWWWSARMIEKTLFTNC 513
>SB_29641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 422
Score = 26.6 bits (56), Expect = 6.7
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 59 VTENVSLQDKRCRRSVCGAPEKGFIXFSKDVDQVNVDDEYYKIGKDYD 202
V +V QDK +VCG+ +G S D+D + +Y ++YD
Sbjct: 90 VLVHVKKQDKNLTATVCGSFRRG-ATSSGDIDILLSHPDYTSSSQNYD 136
>SB_28178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 26.6 bits (56), Expect = 6.7
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 80 QDKRCRRSVCGAPEKGFIXFSKD-VDQVNVDDEYYKIG 190
+D+ RSV +P G S V QV + + Y+KIG
Sbjct: 27 RDRSASRSVSRSPSPGRTSMSSSQVLQVKMQERYFKIG 64
>SB_20011| Best HMM Match : GED (HMM E-Value=0.65)
Length = 427
Score = 26.6 bits (56), Expect = 6.7
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = +2
Query: 92 CRRSVCGAPEKGFIXFSKDV-----DQVNVDDEYYKIGKDYDVEANIDNYTNKKAVEEFL 256
CR+ C + G + F K D++ + +K G+ D +I+N ++K V +L
Sbjct: 7 CRKEDCSPYDIGLV-FDKIASYSPQDKLKFIENVWKPGELLDFPVSIENGKSRKFVLNWL 65
Query: 257 KLYRIGYLPKYY 292
K Y KYY
Sbjct: 66 KKYPWLAYSKYY 77
>SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30)
Length = 1093
Score = 26.6 bits (56), Expect = 6.7
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +3
Query: 12 VLVLAGLIALVQSSVVSPKTYHFKTKDVDAVFVERQ 119
+++LA ++A V +V+PK K +D+D ++E +
Sbjct: 618 LVILAMIVAAVVIIIVAPKCAKAKVRDMDKSWLENE 653
>SB_28721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 26.6 bits (56), Expect = 6.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 146 DVDQVNVDDEYYKIGKDYDVEANIDN 223
D D N+DD+Y G D D + N+D+
Sbjct: 186 DNDDNNLDDDYGTYGDDNDDDDNLDD 211
>SB_13243| Best HMM Match : COX17 (HMM E-Value=1.7)
Length = 483
Score = 26.2 bits (55), Expect = 8.8
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 32 HCPRAIQCGVTENVSLQDKRCRRSVCGAPEKGFIXFSKDVDQVNVDDE 175
HCP C ENV L+ V AP +GF+ + +D+ D E
Sbjct: 225 HCPFERLCVEAENVVLEMPLAGYEVPEAPSRGFL--RRLLDKFKTDTE 270
>SB_9137| Best HMM Match : SCP (HMM E-Value=3.6e-18)
Length = 708
Score = 26.2 bits (55), Expect = 8.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 161 NVDDEYYKIGKDYDVEANIDNYTNKKAVE 247
N D+EY K +Y+VE D N++A E
Sbjct: 100 NDDEEYMKDMPEYNVETKADYKGNEEAAE 128
>SB_13944| Best HMM Match : Citrate_synt (HMM E-Value=0)
Length = 297
Score = 26.2 bits (55), Expect = 8.8
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +2
Query: 131 IXFSKDVDQVNVDDEYYKIGKDY---DVEANIDNYTNKKAVEEFLKLYRIGYLP 283
+ +K +++V ++DEY+K Y D + I VE F L+ IG LP
Sbjct: 207 LDIAKQLEKVALEDEYFKARNLYPNVDFYSGIIYRAMGIPVEMFTVLFAIGRLP 260
>SB_5363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 26.2 bits (55), Expect = 8.8
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 32 HCPRAIQCGVTENVSLQDKRCRRSVCGAPEKGFIXFSKDVDQVNVDDE 175
HCP C ENV L+ V AP +GF+ + +D+ D E
Sbjct: 39 HCPFERLCVEAENVVLEMPLAGYEVPEAPSRGFL--RRLLDKFKTDTE 84
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,638,328
Number of Sequences: 59808
Number of extensions: 206572
Number of successful extensions: 657
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 632178915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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