Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_F22
(329 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084158-15|AAK68556.1| 190|Caenorhabditis elegans Hypothetical... 28 1.4
Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z29443-11|CAK55173.1| 367|Caenorhabditis elegans Hypothetical p... 27 2.4
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 27 3.2
AF026202-1|AAZ82858.1| 755|Caenorhabditis elegans Histone deace... 27 4.2
Z82278-4|CAB05257.2| 487|Caenorhabditis elegans Hypothetical pr... 26 7.3
Z81470-2|CAB03882.2| 422|Caenorhabditis elegans Hypothetical pr... 26 7.3
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 26 7.3
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 25 9.7
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 25 9.7
AF039049-4|AAB94250.2| 293|Caenorhabditis elegans Serpentine re... 25 9.7
>AC084158-15|AAK68556.1| 190|Caenorhabditis elegans Hypothetical
protein Y69A2AR.12 protein.
Length = 190
Score = 28.3 bits (60), Expect = 1.4
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Frame = -3
Query: 267 HFNHNNIRELLILMWYVFIPCLCSV*C*REPT----LGQQTSPPPSNCPTQPLLL 115
H ++ ELL+ WYV + C S P+ G TS PP N + LL
Sbjct: 36 HQQQESLEELLLWWWYVLLQCSSSSAGEIHPSEKSEKGGATSAPPKNTEMREKLL 90
>Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical
protein Y70C5A.2 protein.
Length = 1037
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 106 LFLAGVAITLMFLCWSTFFRICRLVLR 26
LFL G+ +TL+F C+ F IC L ++
Sbjct: 214 LFLLGIQVTLLF-CFLLFLPICFLAIK 239
>Z29443-11|CAK55173.1| 367|Caenorhabditis elegans Hypothetical
protein T07C4.11 protein.
Length = 367
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 114 KAEVVVLGSLMVVGWSAVPVWVLVN 188
K E +LG GW+AV WVL N
Sbjct: 25 KNEPFILGEWSTSGWTAVKDWVLPN 49
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = -2
Query: 184 TRTHTGTADQPTTIKLPNTTTS 119
T T TG+++ P+T +P+TTTS
Sbjct: 285 TITSTGSSNPPSTSTVPSTTTS 306
>AF026202-1|AAZ82858.1| 755|Caenorhabditis elegans Histone
deacetylase protein 4 protein.
Length = 755
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 107 DFKSRSGCVGQFDGGGLVCCPSVGSRQHQTLQRQGIK 217
D R+G +G L S+GS Q+Q+L +Q I+
Sbjct: 258 DEGDRNGLIGSSSTSSLASNVSMGSHQYQSLLKQQIR 294
>Z82278-4|CAB05257.2| 487|Caenorhabditis elegans Hypothetical
protein M162.5 protein.
Length = 487
Score = 25.8 bits (54), Expect = 7.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 140 FDGGGLVCCPSVGSRQH 190
F+GGG + C ++ SRQH
Sbjct: 387 FNGGGFIKCAALVSRQH 403
>Z81470-2|CAB03882.2| 422|Caenorhabditis elegans Hypothetical
protein C14A6.2 protein.
Length = 422
Score = 25.8 bits (54), Expect = 7.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 140 FDGGGLVCCPSVGSRQH 190
F+GGG + C ++ SRQH
Sbjct: 322 FNGGGFIKCAALVSRQH 338
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 25.8 bits (54), Expect = 7.3
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 17 PEPPQNQPTDPKECAPTE 70
P+PPQ PT P AP +
Sbjct: 1232 PQPPQVMPTTPTSAAPPQ 1249
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
protein E01G6.1 protein.
Length = 1391
Score = 25.4 bits (53), Expect = 9.7
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +2
Query: 2 QNVGCP--EPPQNQPTDPKECAPTEKHE-RYRYTR*K*DFKSRSGCVGQFDGGGLVCCP 169
+++GC PQ + ++P EC+PT+ + Y K + ++ C DG + CP
Sbjct: 120 KDLGCATNSAPQLRGSNPVECSPTDGSACKNGYVCSKSQYLNKFICCSNPDGEIMGSCP 178
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 149 HHQTAQHNHFCF*NLISSGCSDNAHVSLLEHI 54
H TAQ N CF N S DN +L +H+
Sbjct: 844 HSLTAQKNGICFSNSNDSFSRDNNRCTLDKHM 875
>AF039049-4|AAB94250.2| 293|Caenorhabditis elegans Serpentine
receptor, class x protein65 protein.
Length = 293
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 109 ILFLAGVAITLMFLCWSTFFRICRL 35
+L L ++I L WS+F+ IC+L
Sbjct: 8 LLVLVPISIVGAVLNWSSFYSICKL 32
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,453,906
Number of Sequences: 27780
Number of extensions: 142577
Number of successful extensions: 593
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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