Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_F21
         (205 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_37776| Best HMM Match : fn3 (HMM E-Value=1.4e-22)                   26   4.1  
SB_27431| Best HMM Match : HEAT (HMM E-Value=2.4)                      25   9.5  

>SB_37776| Best HMM Match : fn3 (HMM E-Value=1.4e-22)
          Length = 1296

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = +3

Query: 102  KEKQCYKEKQLFRAVSRLQSNELNHLIKLNYNL 200
            K+K+C K  + ++A  R++  +LN  ++ N N+
Sbjct: 1159 KDKRCSKLMEEYKANRRVEDEKLNATLRHNVNI 1191


>SB_27431| Best HMM Match : HEAT (HMM E-Value=2.4)
          Length = 195

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 105 EKQCYKEKQLFRAVSRLQSNELNHL 179
           +K+C   KQL R + R+ S+ LNH+
Sbjct: 133 DKRC---KQLLRIIKRMVSSNLNHV 154


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,676,332
Number of Sequences: 59808
Number of extensions: 42514
Number of successful extensions: 171
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 16,821,457
effective HSP length: 46
effective length of database: 14,070,289
effective search space used: 295476069
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)