Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_F21
         (205 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55857-5|AAA98031.1|  602|Caenorhabditis elegans Hypothetical pr...    28   1.0  
Z92835-6|CAB07399.1|  496|Caenorhabditis elegans Hypothetical pr...    25   9.7  
Z75526-8|CAA99773.1|  496|Caenorhabditis elegans Hypothetical pr...    25   9.7  
U50300-6|AAC48109.1|  642|Caenorhabditis elegans Hypothetical pr...    25   9.7  
AF221132-1|AAF82410.1|  498|Caenorhabditis elegans diacylglycero...    25   9.7  

>U55857-5|AAA98031.1|  602|Caenorhabditis elegans Hypothetical
           protein K08D10.5 protein.
          Length = 602

 Score = 27.9 bits (59), Expect = 1.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 178 KWFNSLLCNLETALNSCFSL*HCFSLP 98
           KW  S  C LETA+  C  +   ++LP
Sbjct: 13  KWTRSTTCTLETAVGECLEIGVEYALP 39


>Z92835-6|CAB07399.1|  496|Caenorhabditis elegans Hypothetical
           protein H19N07.4 protein.
          Length = 496

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 165 HYFVIWKLP*IAVFLCNTV 109
           H++ IW  P +A+ LC+ +
Sbjct: 108 HHYSIWSWPNLALILCSNI 126


>Z75526-8|CAA99773.1|  496|Caenorhabditis elegans Hypothetical
           protein H19N07.4 protein.
          Length = 496

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 165 HYFVIWKLP*IAVFLCNTV 109
           H++ IW  P +A+ LC+ +
Sbjct: 108 HHYSIWSWPNLALILCSNI 126


>U50300-6|AAC48109.1|  642|Caenorhabditis elegans Hypothetical
           protein R03H4.1 protein.
          Length = 642

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 168 IHYFVIWKLP*IAVFLCNTVFLYLF 94
           + Y V W  P I +FL NTV  Y+F
Sbjct: 296 VMYLVHW--PIITIFLSNTVKSYIF 318


>AF221132-1|AAF82410.1|  498|Caenorhabditis elegans diacylglycerol
           acyltransferase protein.
          Length = 498

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 165 HYFVIWKLP*IAVFLCNTV 109
           H++ IW  P +A+ LC+ +
Sbjct: 110 HHYSIWSWPNLALILCSNI 128


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,999,292
Number of Sequences: 27780
Number of extensions: 37888
Number of successful extensions: 78
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 12,740,198
effective HSP length: 47
effective length of database: 11,434,538
effective search space used: 228690760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)