Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_F19
         (643 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g16060.1 68415.m01841 non-symbiotic hemoglobin 1 (HB1) (GLB1)...    47   9e-06
At4g11840.1 68417.m01885 phospholipase D gamma 3 / PLD gamma 3 (...    30   1.1  
At2g32620.1 68415.m03982 cellulose synthase family protein simil...    30   1.5  
At5g44880.1 68418.m05503 hypothetical protein similar to unknown...    29   3.5  
At2g14020.1 68415.m01558 hypothetical protein                          29   3.5  
At4g11850.1 68417.m01886 phospholipase D gamma 1 / PLD gamma 1 (...    28   4.6  
At4g11830.2 68417.m01884 phospholipase D gamma 2 / PLD gamma 2 (...    28   6.1  
At4g11830.1 68417.m01883 phospholipase D gamma 2 / PLD gamma 2 (...    28   6.1  
At1g74710.2 68414.m08655 isochorismate synthase 1 (ICS1) / isoch...    28   6.1  
At5g19290.1 68418.m02299 esterase/lipase/thioesterase family pro...    27   8.0  
At2g35600.1 68415.m06030 expressed protein                             27   8.0  

>At2g16060.1 68415.m01841 non-symbiotic hemoglobin 1 (HB1) (GLB1)
           identical to SP|O24520 Non-symbiotic hemoglobin 1 (Hb1)
           (ARAth GLB1) {Arabidopsis thaliana}
          Length = 160

 Score = 47.2 bits (107), Expect = 9e-06
 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
 Frame = +3

Query: 186 TRREIYAVQKSWAPVFANSIPNGAELLRRLFQTFPETKEFFKMIRKLPDEEYIQNPQFRA 365
           T  +   V KSW+ +  NS   G +L  ++F+  P TK+ F  +R  P     QNP+ + 
Sbjct: 10  TEEQEALVVKSWSVMKKNSAELGLKLFIKIFEIAPTTKKMFSFLRDSPIPAE-QNPKLKP 68

Query: 366 HVINLMTSLNLAVNNLNQPEVVAAM---MNKLGESHKRRQIKERHFGDLKQVIVTMFIEV 536
           H +++      +   L +   V      + +LG SH +  + + HF   K  ++    E 
Sbjct: 69  HAMSVFVMCCESAVQLRKTGKVTVRETTLKRLGASHSKYGVVDEHFEVAKYALLETIKEA 128

Query: 537 L 539
           +
Sbjct: 129 V 129


>At4g11840.1 68417.m01885 phospholipase D gamma 3 / PLD gamma 3
           (PLDGAMMA3) identical to phospholipase D gamma 3
           sp:Q9T052 from [Arabidopsis thaliana]
          Length = 866

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +3

Query: 303 FFKMIRKLPDEEYIQNPQFRAHVINLMTSLNLAVNNLNQPEVVAAMMNKLGESHK 467
           + K IR      YI+N  F     N  ++ NL  NNL   E+   + NK+    K
Sbjct: 556 YVKAIRSAQHFIYIENQYFLGSSFNWDSNKNLGANNLIPMEIALKIANKIRAREK 610


>At2g32620.1 68415.m03982 cellulose synthase family protein similar
           to Zea mays cellulose synthase-5 [gi:9622882], -4
           [gi:9622880], -9 [gi:9622890]
          Length = 757

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 531 EVLHLDGDTLTAWDKTVTFWYKHIFETLNTA 623
           EV H D ++ T+W KT+ + Y  + E +NT+
Sbjct: 435 EVGHCDYESQTSWGKTIGWLYDSMSEDMNTS 465


>At5g44880.1 68418.m05503 hypothetical protein similar to unknown
           protein (pir||T00729)
          Length = 161

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 531 EVLHLDGDTLTAWDKTVTFWYKHIFETLNTAEES 632
           E  +L+G     W+K +    KHIF+ +N  +E+
Sbjct: 37  EAHYLEGLRYACWEKDLVMAKKHIFKAVNKVDEA 70


>At2g14020.1 68415.m01558 hypothetical protein
          Length = 161

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 531 EVLHLDGDTLTAWDKTVTFWYKHIFETLNTAEES 632
           E  +L+G     W+K +    KHIF+ +N  +E+
Sbjct: 37  EAHYLEGLRYACWEKDLDMAEKHIFKAINKVDEA 70


>At4g11850.1 68417.m01886 phospholipase D gamma 1 / PLD gamma 1
           (PLDGAMMA1) identical to phospholipase D gamma 1
           SP:Q9T053 from [Arabidopsis thaliana]
          Length = 858

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = +3

Query: 303 FFKMIRKLPDEEYIQNPQFRAHVINLMTSLNLAVNNLNQPEVVAAMMNKLGESHK 467
           + K IR      YI+N  F     N  ++ +L  NNL   E+   + NK+    K
Sbjct: 549 YVKAIRSAQHFIYIENQYFLGSSFNWDSNKDLGANNLIPMEIALKIANKIRAREK 603


>At4g11830.2 68417.m01884 phospholipase D gamma 2 / PLD gamma 2
           (PLDGAMMA2) identical to SP|Q9T051 Phospholipase D gamma
           2 (EC 3.1.4.4) (AtPLDgamma2) (PLD gamma 2) [Arabidopsis
           thaliana]
          Length = 856

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +3

Query: 303 FFKMIRKLPDEEYIQNPQFRAHVINLMTSLNLAVNNLNQPEVVAAMMNKL 452
           + K IR      YI+N  F     N  ++ +L  NNL   E+   + NK+
Sbjct: 546 YVKAIRSAQHFIYIENQYFLGSSFNWDSNKDLGANNLIPMEIALKIANKI 595


>At4g11830.1 68417.m01883 phospholipase D gamma 2 / PLD gamma 2
           (PLDGAMMA2) identical to SP|Q9T051 Phospholipase D gamma
           2 (EC 3.1.4.4) (AtPLDgamma2) (PLD gamma 2) [Arabidopsis
           thaliana]
          Length = 824

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +3

Query: 303 FFKMIRKLPDEEYIQNPQFRAHVINLMTSLNLAVNNLNQPEVVAAMMNKL 452
           + K IR      YI+N  F     N  ++ +L  NNL   E+   + NK+
Sbjct: 514 YVKAIRSAQHFIYIENQYFLGSSFNWDSNKDLGANNLIPMEIALKIANKI 563


>At1g74710.2 68414.m08655 isochorismate synthase 1 (ICS1) /
           isochorismate mutase identical to GI:17223087 and
           GB:AF078080; contains Pfam profile PF00425: chorismate
           binding enzyme; contains TIGRfam profile TIGR00543:
           isochorismate synthases; identical to cDNA isochorismate
           synthase 1 precursor (ICS1) nuclear gene for plastid
           product GI:17223086
          Length = 622

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 520 VTITCFRSPKCLSLICLRLCDSPS 449
           + + C+++P   SL C   C SPS
Sbjct: 564 IMVLCYQNPNFYSLFCCCFCSSPS 587


>At5g19290.1 68418.m02299 esterase/lipase/thioesterase family
           protein low similarity to monoglyceride lipase [Homo
           sapiens] GI:14594904; contains Interpro entry IPR000379
          Length = 330

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +3

Query: 153 DPDEVNPISGLTRREIYAVQK-SWAPVFANSIPNGAELLRRLFQTFPETK 299
           D +E NP   LT  E YA    S +  F  + P G +L  + +   P TK
Sbjct: 8   DANEHNPFGSLTADEFYAKHSVSHSSAFITN-PRGLKLFTQWWSPLPPTK 56


>At2g35600.1 68415.m06030 expressed protein
          Length = 331

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +3

Query: 84  LKRVKTGQKITMGNWISQFWWGGDPDEVNPISGLTRREIYAVQ 212
           LKR++  +++    W +Q WWG + D +  +  + R    A+Q
Sbjct: 161 LKRIRFSREV-FDKWQAQRWWGENYDRIVELYNVQRFNRQALQ 202


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,596,171
Number of Sequences: 28952
Number of extensions: 310142
Number of successful extensions: 884
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1324661040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)