Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_F17
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    27   0.13 
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          27   0.13 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    24   1.2  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   3.6  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   3.6  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   3.6  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   3.6  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   3.6  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    22   3.6  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   3.6  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   8.4  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   8.4  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   8.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   8.4  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   8.4  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   8.4  

>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 507 CT*TPRTSYRQSPISWNANYQTNS*YCSRNNYK 605
           C     +SY+ +   +N NYQ N  Y + NNY+
Sbjct: 196 CQYDTESSYQFNDPQFNFNYQYNQAYSNYNNYQ 228


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 507 CT*TPRTSYRQSPISWNANYQTNS*YCSRNNYK 605
           C     +SY+ +   +N NYQ N  Y + NNY+
Sbjct: 216 CQYDTESSYQFNDPQFNFNYQYNQAYSNYNNYQ 248


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -1

Query: 347 SKRISRRR-GSWTSASLVGACDSAESRCRERLQTP 246
           SKR S ++ GS      V  CDS+ESR    ++ P
Sbjct: 405 SKRNSEKKCGSLREIKEVSDCDSSESRKEVYVRVP 439


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 128 HRILLSPVRPYHQSAYAH 75
           H++    + PYH S Y H
Sbjct: 279 HKMASMNIVPYHMSPYGH 296


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 128 HRILLSPVRPYHQSAYAH 75
           H++    + PYH S Y H
Sbjct: 279 HKMASMNIVPYHMSPYGH 296


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 128 HRILLSPVRPYHQSAYAH 75
           H++    + PYH S Y H
Sbjct: 279 HKMASMNIVPYHMSPYGH 296


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 128 HRILLSPVRPYHQSAYAH 75
           H++    + PYH S Y H
Sbjct: 235 HKMASMNIVPYHMSPYGH 252


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 128 HRILLSPVRPYHQSAYAH 75
           H++    + PYH S Y H
Sbjct: 279 HKMASMNIVPYHMSPYGH 296


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 128 HRILLSPVRPYHQSAYAH 75
           H++    + PYH S Y H
Sbjct: 67  HKMASMNIVPYHMSPYGH 84


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 128 HRILLSPVRPYHQSAYAH 75
           H++    + PYH S Y H
Sbjct: 279 HKMASMNIVPYHMSPYGH 296


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 180 TTSDCTSPS*FLQAHTNPPDPFIA 109
           T+ +   PS  +  +T+PP P ++
Sbjct: 117 TSFESGKPSGVISTNTSPPSPILS 140


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 242 SVRQDTSVLTSSFPANRNP 186
           +V +DT V+ S F  +R+P
Sbjct: 369 TVEKDTMVMISMFAIHRDP 387


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 269 TVTRHYRMHQQGKP 310
           T+T+H R+H   KP
Sbjct: 92  TLTKHLRIHSGEKP 105


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 269 TVTRHYRMHQQGKP 310
           T+T+H R+H   KP
Sbjct: 348 TLTKHLRIHSGEKP 361


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 65  KIWYEHRLIDDMVAQAIKGSGG 130
           KIW+++R +        KG GG
Sbjct: 287 KIWFQNRRMKWKKENKTKGEGG 308


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 65  KIWYEHRLIDDMVAQAIKGSGG 130
           KIW+++R +        KG GG
Sbjct: 289 KIWFQNRRMKWKKENKTKGEGG 310


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,817
Number of Sequences: 336
Number of extensions: 3949
Number of successful extensions: 25
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)