Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_F17
(623 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0194 + 28327328-28327376,28327699-28327742,28327852-283279... 275 2e-74
01_06_0109 - 26526691-26526775,26526894-26527019,26527228-265273... 270 5e-73
04_04_0457 + 25359486-25359571,25360690-25360782,25361561-253616... 264 5e-71
01_01_1031 + 8169505-8169553,8169831-8169905,8170395-8170438,817... 248 3e-66
03_02_0816 + 11487811-11488708,11488835-11489235 30 1.3
08_02_1171 + 24880363-24881355,24882553-24882702,24883505-248842... 29 2.3
05_04_0402 - 20991628-20991755,20992461-20992578,20992670-209927... 29 2.3
04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120... 29 4.0
12_01_0907 + 8818357-8819033,8819077-8821352,8821465-8821730 28 5.2
11_06_0204 + 21191611-21192807 28 5.2
11_01_0580 + 4624111-4624549,4625243-4625955 28 5.2
08_02_0958 - 23044708-23046045,23046131-23046363,23047059-230471... 28 5.2
10_08_0383 - 17424194-17425567 28 6.9
07_01_0894 - 7501918-7502535,7503568-7503604,7503781-7503951,750... 27 9.2
02_01_0043 + 300122-300907,301447-301722,302347-302481 27 9.2
01_01_1159 + 9224331-9224473,9224586-9224727,9225412-9225483,922... 27 9.2
>05_07_0194 +
28327328-28327376,28327699-28327742,28327852-28327961,
28328250-28328287,28328371-28328448,28328527-28328580,
28328663-28328764,28329152-28329237,28329327-28329430,
28329542-28329610,28329689-28329804,28329949-28329983,
28330152-28330294,28330473-28330598,28330700-28330784
Length = 412
Score = 275 bits (675), Expect = 2e-74
Identities = 118/189 (62%), Positives = 149/189 (78%)
Frame = +2
Query: 2 RFKDIFEEVYQSDYKKQFDDAKIWYEHRLIDDMVAQAIKGSGGFVWACKNYDGDVQSDVV 181
RFKDIF+EVY++ +K +F+ A IWYEHRLIDDMVA A+K GG+VWACKNYDGDVQSD +
Sbjct: 222 RFKDIFQEVYEAQWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFL 281
Query: 182 AQGYGSLGMMTSVLMCPDGRTVESEAAHGTVTRHYRMHQQGKPTSTNPVASIYAWTRGLV 361
AQG+GSLG+MTSVL+CPDG+T+E+EAAHGTVTRHYR+HQ+G TSTN +ASI+AWTRGL
Sbjct: 282 AQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWTRGLA 341
Query: 362 HRAKLDGTPXXXXXXXXXXXXCVECIDSGKMTKDLVICIHGLANTKEGMYLNTEDFLQAI 541
HRAKLD C+ ++SGKMTKDL + +HG +N YLNTE+F+ A+
Sbjct: 342 HRAKLDDNARLLDFTQKLEAACIGAVESGKMTKDLALLVHGSSNVTRSHYLNTEEFIDAV 401
Query: 542 ADQLERKLS 568
AD+L +L+
Sbjct: 402 ADELRSRLA 410
>01_06_0109 -
26526691-26526775,26526894-26527019,26527228-26527370,
26527521-26527555,26527676-26527791,26527868-26527936,
26528070-26528173,26528253-26528338,26528429-26528530,
26528609-26528662,26528763-26528840,26528936-26528973,
26529235-26529344,26529463-26529506,26530232-26530280
Length = 412
Score = 270 bits (663), Expect = 5e-73
Identities = 118/189 (62%), Positives = 148/189 (78%)
Frame = +2
Query: 2 RFKDIFEEVYQSDYKKQFDDAKIWYEHRLIDDMVAQAIKGSGGFVWACKNYDGDVQSDVV 181
RFKDIF+EVY++ +K +F+ A IWYEHRLIDDMVA A+K GG+VWACKNYDGDVQSD +
Sbjct: 222 RFKDIFQEVYEAGWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFL 281
Query: 182 AQGYGSLGMMTSVLMCPDGRTVESEAAHGTVTRHYRMHQQGKPTSTNPVASIYAWTRGLV 361
AQG+GSLG+MTSVL+CPDG+T+E+EAAHGTVTRH+R+HQ+G TSTN +ASI+AWTRGL
Sbjct: 282 AQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLA 341
Query: 362 HRAKLDGTPXXXXXXXXXXXXCVECIDSGKMTKDLVICIHGLANTKEGMYLNTEDFLQAI 541
HRAKLD CV ++SGKMTKDL + IHG +N YLNTE+F+ A+
Sbjct: 342 HRAKLDDNARLLDFALKLEAACVGTVESGKMTKDLALLIHGSSNVTRSHYLNTEEFIDAV 401
Query: 542 ADQLERKLS 568
A +L +L+
Sbjct: 402 AAELRSRLA 410
>04_04_0457 +
25359486-25359571,25360690-25360782,25361561-25361622,
25361758-25361816,25363624-25363733,25364795-25364829,
25365469-25365546,25365952-25366005,25366277-25366362,
25366468-25366571,25366986-25367054,25367135-25367250,
25367387-25367421,25367512-25367654,25367808-25367930,
25368463-25368556
Length = 448
Score = 264 bits (646), Expect = 5e-71
Identities = 116/188 (61%), Positives = 148/188 (78%)
Frame = +2
Query: 2 RFKDIFEEVYQSDYKKQFDDAKIWYEHRLIDDMVAQAIKGSGGFVWACKNYDGDVQSDVV 181
RFKDIF+EVY+ +K++F++ IWYEHRLIDDMVA A+K GG+VWACKNYDGDVQSD +
Sbjct: 256 RFKDIFQEVYEEKWKEKFEENSIWYEHRLIDDMVAYAVKSEGGYVWACKNYDGDVQSDFL 315
Query: 182 AQGYGSLGMMTSVLMCPDGRTVESEAAHGTVTRHYRMHQQGKPTSTNPVASIYAWTRGLV 361
AQG+GSLG+M+SVL+ DG+T+E+EAAHGTVTRH+R+HQ+G+ TSTN +ASI+AWTRGL
Sbjct: 316 AQGFGSLGLMSSVLLSSDGKTLEAEAAHGTVTRHFRLHQKGQETSTNSIASIFAWTRGLE 375
Query: 362 HRAKLDGTPXXXXXXXXXXXXCVECIDSGKMTKDLVICIHGLANTKEGMYLNTEDFLQAI 541
HRAKLD C+E ++SGKMTKDL + IHG T+E YLNTE+F+ A+
Sbjct: 376 HRAKLDKNDRLLDFTKKLESACIETVESGKMTKDLALLIHGPKVTRE-FYLNTEEFIDAV 434
Query: 542 ADQLERKL 565
A QL K+
Sbjct: 435 AQQLREKI 442
>01_01_1031 +
8169505-8169553,8169831-8169905,8170395-8170438,
8170633-8170742,8170960-8170997,8171055-8171186,
8171298-8171351,8171424-8171525,8172679-8172764,
8172870-8172973,8173056-8173124,8173156-8173209,
8173210-8173325,8173420-8173454,8173637-8173779,
8174105-8174227,8174305-8174398
Length = 475
Score = 248 bits (607), Expect = 3e-66
Identities = 118/207 (57%), Positives = 146/207 (70%), Gaps = 18/207 (8%)
Frame = +2
Query: 2 RFKDIFEEVYQSDYKKQFDDAKIW------------------YEHRLIDDMVAQAIKGSG 127
RFKDIF+E Y++ ++ +FDDA IW YEHRLIDDMVA A+K G
Sbjct: 265 RFKDIFQENYETKWRAKFDDAGIWNMEPYFPPLCPNHFCCGRYEHRLIDDMVAYALKSEG 324
Query: 128 GFVWACKNYDGDVQSDVVAQGYGSLGMMTSVLMCPDGRTVESEAAHGTVTRHYRMHQQGK 307
G+VWACKNYDGDVQSD++AQG+GSLG+MTSVL+CPDGRT+E+EAAHGTVTRHYR+HQ+G
Sbjct: 325 GYVWACKNYDGDVQSDLIAQGFGSLGLMTSVLVCPDGRTIEAEAAHGTVTRHYRVHQKGG 384
Query: 308 PTSTNPVASIYAWTRGLVHRAKLDGTPXXXXXXXXXXXXCVECIDSGKMTKDLVICIHGL 487
TSTN +ASI+AWT GL HRAKLD CV ++SGKMTKDL + +HG
Sbjct: 385 ETSTNSIASIFAWTTGLGHRAKLDDNKRLLDFVQKLEAACVGTVESGKMTKDLALLVHG- 443
Query: 488 ANTKEGMYLNTEDFLQAIADQLERKLS 568
N YLNT +F+ A+A+ L +LS
Sbjct: 444 PNVSRDKYLNTVEFIDAVAEDLRTRLS 470
>03_02_0816 + 11487811-11488708,11488835-11489235
Length = 432
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 5/84 (5%)
Frame = -1
Query: 437 CIPHRPLQGRVQTAPVLEYRPA*HGEP-----NPSSKRISRRRGSWTSASLVGACDSAES 273
C P P Q PV Y P+ G+P +P+ + RRR S A + +
Sbjct: 58 CTPPSPPPPFRQKVPVATYSPSSQGQPPQQQMHPAPTPVRRRRSCDAPRSPTIAPEHRRA 117
Query: 272 RCRERLQTPPSVRQDTSVLTSSFP 201
C TPP++ L S P
Sbjct: 118 SCDSPRPTPPAIVARLMGLEESAP 141
>08_02_1171 +
24880363-24881355,24882553-24882702,24883505-24884210,
24885012-24885404,24885759-24885805,24886088-24886111
Length = 770
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1
Query: 191 NPALLHRTARHRRNSYRPIRIHRILLSPVRPYHQSAYAHTKSLRHQ 54
NP L R R RR P R + ++ PVR YH + H S H+
Sbjct: 64 NPDLRRREPRRRRRRRAPRRRRKAMM-PVRTYHHH-HHHNNSNNHR 107
>05_04_0402 -
20991628-20991755,20992461-20992578,20992670-20992762,
20992841-20992978,20993070-20993197,20993270-20993430,
20993548-20993638,20993731-20993787,20993986-20994139
Length = 355
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -2
Query: 160 TVVILTGPYESTGSFYRLCDHIINQPMLIPNLCVIKLLLVITLI 29
TV+IL P E T S H+ QP LC + LV++LI
Sbjct: 129 TVIILHAPEEETPSSVEQIWHLATQPAF---LCYVAFALVVSLI 169
>04_04_1571 + 34504087-34504421,34505002-34505731,34506091-34512077,
34512493-34513964,34514114-34514377,34514761-34514978,
34515759-34516030,34516190-34516559,34516578-34516797,
34516819-34518931,34518941-34519193,34519269-34519401,
34520597-34521114,34521207-34522115,34522195-34522368,
34522833-34522882,34523963-34524035,34524413-34524477,
34524736-34525522,34525622-34525878,34525989-34526109,
34526315-34526956
Length = 5320
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/60 (35%), Positives = 27/60 (45%)
Frame = -1
Query: 347 SKRISRRRGSWTSASLVGACDSAESRCRERLQTPPSVRQDTSVLTSSFPANRNPALLHRT 168
S R RR + TSA L+ + S ++ PS R+D SV PA ALL T
Sbjct: 4804 SSRPGRRHPAITSAVLLASDQSLTCSSPPLIELQPSGRRDNSVQFQVNPAAAMAALLMNT 4863
>12_01_0907 + 8818357-8819033,8819077-8821352,8821465-8821730
Length = 1072
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 245 PSVRQDTSVLTSSFPANRNPALLHRTAR--HRRNSYRPIRIHRILLSPV----RPYHQSA 84
P +R D + ++ A+ + A AR + R +P IH +L+SP+ RPY S
Sbjct: 285 PELRPDKAATSAHATADGHGAPPPWAARWHNARTELQPAHIHAVLMSPMEFEWRPYGSSG 344
Query: 83 YA 78
+A
Sbjct: 345 FA 346
>11_06_0204 + 21191611-21192807
Length = 398
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -1
Query: 542 RLPVGSPRCLSTCPL*CSPSRECKSPNP 459
RLP G P L C L C P R S +P
Sbjct: 31 RLPPGDPALLVRCSLVCKPWRRLLSSDP 58
>11_01_0580 + 4624111-4624549,4625243-4625955
Length = 383
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +2
Query: 212 TSVLMCPDGRTVESEAAHGTVTRHYRMHQQGKPTSTNPVASIYAWTRGLVHRAKLDG 382
T M P TV + HG + + + + PT T VA L+HR ++DG
Sbjct: 135 TKTDMMPWTATVTVQG-HGFIAQDVTIENKAGPTGTPAVALRCDSNMSLIHRCRIDG 190
>08_02_0958 -
23044708-23046045,23046131-23046363,23047059-23047199,
23047296-23048334
Length = 916
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -1
Query: 260 RLQTPPSVRQDTSVLTSSFPANRNPALLHRTARHRRNSYRPIR--IHRILLSP 108
+L+ PSVR T+ RNP L+ T +H N P+ +H ++P
Sbjct: 86 QLEVEPSVRDARDEGTADAWIERNPLLIRLTGKHPLNCEAPLARLMHHGFITP 138
>10_08_0383 - 17424194-17425567
Length = 457
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 377 PA*HGEPNPSSKRISRRRGSWTSAS 303
PA H P+P + + RRR +TS+S
Sbjct: 86 PAPHAPPHPPPRHLPRRRSPFTSSS 110
>07_01_0894 -
7501918-7502535,7503568-7503604,7503781-7503951,
7504396-7504631,7504796-7504867,7504963-7505097,
7505544-7505549
Length = 424
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 188 GYGSLGMMTSVLMCPDGRTVESEAAHGTV 274
G S+G T +LM P G +++E+ G V
Sbjct: 363 GVASVGAQTGILMGPSGVGIDAESTKGAV 391
>02_01_0043 + 300122-300907,301447-301722,302347-302481
Length = 398
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 227 TSVLTSSFPANRNPALLHRTARHR 156
T +T+S PA R+P LLH + HR
Sbjct: 89 TPPVTTSCPALRDPFLLHHSLAHR 112
>01_01_1159 +
9224331-9224473,9224586-9224727,9225412-9225483,
9225853-9225933,9226031-9226144,9226770-9226826,
9227209-9227310,9227617-9227767,9227851-9227927,
9228721-9228828,9229684-9229754,9230546-9230687,
9230903-9231001,9231112-9231240,9231445-9231559,
9231786-9231853,9233410-9233523,9233587-9233703,
9234079-9234132,9234221-9234326,9235272-9235402,
9235489-9235557
Length = 753
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -2
Query: 466 QILSHFPTIDAFHTGLFK--GECKPLQFWST 380
++++ FPT ++H FK GE P Q W T
Sbjct: 670 ELVNTFPTNASYHIQRFKGLGEMMPAQLWET 700
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,332,952
Number of Sequences: 37544
Number of extensions: 438942
Number of successful extensions: 1270
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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