Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_F17
(623 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17538| Best HMM Match : Iso_dh (HMM E-Value=0) 213 7e-56
SB_26442| Best HMM Match : Iso_dh (HMM E-Value=3.6e-37) 190 1e-48
SB_33425| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.57
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_9471| Best HMM Match : VQ (HMM E-Value=6.2) 31 1.0
SB_48853| Best HMM Match : TBCA (HMM E-Value=0.98) 30 1.8
SB_38118| Best HMM Match : TBCA (HMM E-Value=3.2) 30 1.8
SB_37361| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_7601| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_47303| Best HMM Match : CPSF_A (HMM E-Value=0) 29 3.1
SB_35733| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.058) 29 3.1
SB_12807| Best HMM Match : Extensin_2 (HMM E-Value=0.56) 29 3.1
SB_6936| Best HMM Match : TP2 (HMM E-Value=1.1) 29 3.1
SB_56325| Best HMM Match : Ribosomal_L14e (HMM E-Value=0.84) 28 5.4
SB_44450| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_20266| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_12964| Best HMM Match : RVT_1 (HMM E-Value=5.6e-31) 28 5.4
SB_40985| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_1787| Best HMM Match : Peptidase_S9 (HMM E-Value=1.5e-08) 28 5.4
SB_50940| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_48371| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_23878| Best HMM Match : Big_2 (HMM E-Value=0.65) 28 7.1
SB_19285| Best HMM Match : Galactosyl_T (HMM E-Value=0.69) 28 7.1
SB_57353| Best HMM Match : TIP49 (HMM E-Value=0) 27 9.4
SB_52053| Best HMM Match : Cytomega_UL20A (HMM E-Value=1.9) 27 9.4
SB_47367| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_17538| Best HMM Match : Iso_dh (HMM E-Value=0)
Length = 644
Score = 213 bits (521), Expect = 7e-56
Identities = 99/163 (60%), Positives = 117/163 (71%)
Frame = +2
Query: 2 RFKDIFEEVYQSDYKKQFDDAKIWYEHRLIDDMVAQAIKGSGGFVWACKNYDGDVQSDVV 181
RFKDIF+++Y+ +Y+ QF + IWYEHRLIDDMVA A+K GGFVWA KNYDGDVQSD +
Sbjct: 211 RFKDIFQDIYEREYESQFKELGIWYEHRLIDDMVAYALKSEGGFVWAAKNYDGDVQSDTL 270
Query: 182 AQGYGSLGMMTSVLMCPDGRTVESEAAHGTVTRHYRMHQQGKPTSTNPVASIYAWTRGLV 361
AQ DG+T+ESEAAHGTVTRHYR HQ+G TSTNP+ASI+AWT+GL
Sbjct: 271 AQ---------------DGKTIESEAAHGTVTRHYREHQKGNETSTNPIASIFAWTQGLS 315
Query: 362 HRAKLDGTPXXXXXXXXXXXXCVECIDSGKMTKDLVICIHGLA 490
HRAKLDG P CV+ +D GKMTKDL CI+GLA
Sbjct: 316 HRAKLDGNPELKKFCKALEKACVDTVDQGKMTKDLAACIYGLA 358
>SB_26442| Best HMM Match : Iso_dh (HMM E-Value=3.6e-37)
Length = 296
Score = 190 bits (462), Expect = 1e-48
Identities = 82/102 (80%), Positives = 93/102 (91%)
Frame = +2
Query: 26 VYQSDYKKQFDDAKIWYEHRLIDDMVAQAIKGSGGFVWACKNYDGDVQSDVVAQGYGSLG 205
+Y +YK +F+++ IWYEHRLIDDMVA A+K GGF+WACKNYDGDVQSD VAQG+GSLG
Sbjct: 171 LYMREYKSKFEESNIWYEHRLIDDMVAFALKTEGGFIWACKNYDGDVQSDSVAQGFGSLG 230
Query: 206 MMTSVLMCPDGRTVESEAAHGTVTRHYRMHQQGKPTSTNPVA 331
MMTSVL+CPDG+TVESEAAHGTVTRHYRMHQQGK TSTNPVA
Sbjct: 231 MMTSVLVCPDGKTVESEAAHGTVTRHYRMHQQGKETSTNPVA 272
>SB_33425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 957
Score = 31.5 bits (68), Expect = 0.57
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = -1
Query: 527 SPRCLSTCPL*CSPSRECKSPNP*SFSHYRCIPHRPLQGRVQTAPVLEYRPA*HGEPN 354
SP + P CSP REC P S + +C PH + +P+ Y P PN
Sbjct: 77 SPSGECSTPEECSPPRECSPPGECS-TPEKCSPHGECYAPEEYSPLGGYSPPEECSPN 133
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = -1
Query: 275 SRCRERLQTPPSVRQDTSVLTSSFPANRNPALLHRTARHRRNSYRPIRIHRILLSPVRPY 96
SR R R ++P R+ S +R+P+ HR+ R R S P R H SP
Sbjct: 222 SRSRSRSRSPRRRRRSRSPRRRR--RSRSPSPHHRSHRSRSRSRSPRRRHSRSRSPTHRR 279
Query: 95 HQSAYAHTKSLRHQ 54
H+S + +H+
Sbjct: 280 HRSRSHSPEKKKHK 293
>SB_9471| Best HMM Match : VQ (HMM E-Value=6.2)
Length = 307
Score = 30.7 bits (66), Expect = 1.0
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 12/105 (11%)
Frame = +2
Query: 44 KKQFDDAKIWYE-HRLIDDMVAQAIKG---SGGFVWACKNYDGDVQ-------SDVVAQG 190
++Q D+A +W R ++ ++G G +++A ++ GD + +D
Sbjct: 192 QEQGDEAVLWRTPQRTVELFAGSNVEGLANDGRYLYAIEDRHGDGRLLRYDPSNDTTVVL 251
Query: 191 YGSLGMMTSVLMCPDGRTVESEAAHGTVTR-HYRMHQQGKPTSTN 322
L ++ CPDGR SE + GTV++ H H T N
Sbjct: 252 RTGLDQAEAITACPDGRLFYSEKSSGTVSQVHAEGHDSVVLTGLN 296
>SB_48853| Best HMM Match : TBCA (HMM E-Value=0.98)
Length = 220
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -1
Query: 257 LQTPPSVRQDTSVLTSSFPANRNPALLHRTARHRR-NSYR-PIRIHRILLSPVRP 99
+QTPPS ++ VLT + + NP + R +R RR N+ +IH S ++P
Sbjct: 69 IQTPPSTKRQLRVLTPT--SLENPMITPRESRRRRVNTIEAAAKIHGATKSNIKP 121
>SB_38118| Best HMM Match : TBCA (HMM E-Value=3.2)
Length = 675
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -1
Query: 257 LQTPPSVRQDTSVLTSSFPANRNPALLHRTARHRR-NSYR-PIRIHRILLSPVRP 99
+QTPPS ++ VLT + + NP + R +R RR N+ +IH S ++P
Sbjct: 64 IQTPPSTKRQLRVLTPT--SLENPMITPRESRRRRVNTIEAAAKIHGATKSNIKP 116
>SB_37361| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -1
Query: 257 LQTPPSVRQDTSVLTSSFPANRNPALLHRTARHRR-NSYR-PIRIHRILLSPVRP 99
+QTPPS ++ VLT + + NP + R +R RR N+ +IH S ++P
Sbjct: 15 IQTPPSTKRQLRVLTPT--SLENPMITPRESRRRRVNTIEAAAKIHGATNSNIKP 67
>SB_7601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -1
Query: 257 LQTPPSVRQDTSVLTSSFPANRNPALLHRTARHRR-NSYR-PIRIHRILLSPVRP 99
+QTPPS ++ VLT + + NP + R +R RR N+ +IH S ++P
Sbjct: 15 IQTPPSTKRQLRVLTPT--SLENPMITPRESRRRRVNTIEAAAKIHGATNSNIKP 67
>SB_47303| Best HMM Match : CPSF_A (HMM E-Value=0)
Length = 1291
Score = 29.1 bits (62), Expect = 3.1
Identities = 28/84 (33%), Positives = 37/84 (44%)
Frame = -1
Query: 617 NILYLIIVTRTISRVSLIVCVPADRRLPVGSPRCLSTCPL*CSPSRECKSPNP*SFSHYR 438
+I+ L++ S SL C P+ LP SP S+ L CSPS +P S +YR
Sbjct: 1193 SIIILLLPCSPSSSFSL-PCSPSSFLLPC-SP---SSFLLPCSPSSFSLPCSPSSSFYYR 1247
Query: 437 CIPHRPLQGRVQTAPVLEYRPA*H 366
+ H P RV YR H
Sbjct: 1248 VLRHHPFHYRVLRHHPFYYRVLRH 1271
>SB_35733| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.058)
Length = 448
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -1
Query: 161 HRRNSYRPIRIHRILLSPVRPYHQSAYAHTKSLRHQTAS 45
H SY I H PYH + Y H ++ H T S
Sbjct: 344 HNTVSYHTIPCHTTRTCHTIPYHTTQYYHYTNMSHNTVS 382
>SB_12807| Best HMM Match : Extensin_2 (HMM E-Value=0.56)
Length = 430
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 210 IIPSEP*PCATTSDCTSPS*FLQAHTNPPDPFIA 109
+ P P P ATT+ T+ + NPPDP +A
Sbjct: 9 VSPVNPAPAATTAPATNAAPAAANPPNPPDPHVA 42
>SB_6936| Best HMM Match : TP2 (HMM E-Value=1.1)
Length = 256
Score = 29.1 bits (62), Expect = 3.1
Identities = 31/102 (30%), Positives = 39/102 (38%), Gaps = 3/102 (2%)
Frame = -1
Query: 428 HRPLQGRVQTAPVLEYRPA*HGEPNPSSKRISRRR--GSWTSASLVGACDSAESRCRERL 255
H+ R +P +RP SK SR R G S S+ + DS +SR
Sbjct: 89 HQSRATRRSKSPKHRHRPESRSRSGSRSKSRSRSRSRGRSRSYSISISPDSHKSRSESPS 148
Query: 254 QTPPSV-RQDTSVLTSSFPANRNPALLHRTARHRRNSYRPIR 132
S RQ S S P NR L + + NSY P R
Sbjct: 149 SDGESPDRQRPSPHRRSRPRNRKDRQLDKKTKTLPNSYAPKR 190
>SB_56325| Best HMM Match : Ribosomal_L14e (HMM E-Value=0.84)
Length = 650
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -1
Query: 257 LQTPPSVRQDTSVLTSSFPANRNPALLHRTARHRR 153
+QTPPS ++ VLT + + NP + R +R RR
Sbjct: 169 IQTPPSTKRQLRVLTPT--SLENPMITPRDSRRRR 201
>SB_44450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 28.3 bits (60), Expect = 5.4
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 522 RTSYRQSPISWNANYQTNS*YCSRNNYK 605
R Y + P++WN N+ + + NNY+
Sbjct: 107 RDEYERDPLAWNPNHHAHHRNINNNNYE 134
>SB_20266| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 373 LSTVNQTPRPSVYRGDGVRGRRLPLLVHAI 284
LS +TPRP VY+ + R+LP H I
Sbjct: 123 LSRTRRTPRPDVYQSRPSQRRQLPSYQHLI 152
>SB_12964| Best HMM Match : RVT_1 (HMM E-Value=5.6e-31)
Length = 1273
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -1
Query: 257 LQTPPSVRQDTSVLTSSFPANRNPALLHRTARHRR 153
+QTPPS ++ VLT + + NP + R +R RR
Sbjct: 937 IQTPPSTKRQLRVLTPT--SLENPMITPRDSRRRR 969
>SB_40985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -1
Query: 257 LQTPPSVRQDTSVLTSSFPANRNPALLHRTARHRR 153
+QTPPS ++ VLT + + NP + R +R RR
Sbjct: 15 IQTPPSTKRQLRVLTPT--SLENPMITPRESRRRR 47
>SB_1787| Best HMM Match : Peptidase_S9 (HMM E-Value=1.5e-08)
Length = 1057
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 188 GYGSLGMMTSVLMCPDGRTVESEAAHGTVT-RHYRMHQQGKPTST 319
G+G+L T + C D T +S HGTVT R H+ G T T
Sbjct: 44 GHGTL--TTRLRSCHDTITAQSHHNHGTVTPRSRHTHRDGHGTLT 86
>SB_50940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 27.9 bits (59), Expect = 7.1
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 522 RTSYRQSPISWNANYQTNS*YCSRNNY 602
R Y + P++WN N+ + + NNY
Sbjct: 340 RDEYERDPLAWNPNHHAHHRNINNNNY 366
>SB_48371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 811
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 242 TVESEAAHGTVTRHYRMHQQGKPTSTNPVASIYAWT 349
T++++ +G + H+R Q P S NP A + WT
Sbjct: 476 TLQAKVLYGFILIHFRRRFQKYPDSLNP-ACVLVWT 510
>SB_23878| Best HMM Match : Big_2 (HMM E-Value=0.65)
Length = 1060
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 74 YEHRLIDDMVAQAIKGSGGFVWACKN 151
Y+ ++ D+V QA GSG ++W N
Sbjct: 375 YQLKIRFDLVLQAAGGSGSYIWTSSN 400
>SB_19285| Best HMM Match : Galactosyl_T (HMM E-Value=0.69)
Length = 263
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 242 TVESEAAHGTVTRHYRMHQQGKPTSTNPVASIYAWT 349
T++++ +G + H+R Q P S NP A + WT
Sbjct: 49 TLQAKVLYGFILIHFRRRFQKYPDSLNP-ACVLVWT 83
>SB_57353| Best HMM Match : TIP49 (HMM E-Value=0)
Length = 283
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 182 AQGYGSLGMMTSVLMCPDGRTVESEAAHGTVTRH 283
A+ Y ++G T + CP+G + + TVT H
Sbjct: 23 ARDYDAMGPQTKFVQCPEGELQKRKEVVHTVTLH 56
>SB_52053| Best HMM Match : Cytomega_UL20A (HMM E-Value=1.9)
Length = 493
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 522 RTSYRQSPISWNANYQTNS*YCSRNNY 602
R Y Q P++WN N+ + + N+Y
Sbjct: 383 RDEYEQDPLAWNPNHHAHHRNINNNDY 409
>SB_47367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 914
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 212 TSVLMCPDGRTVESEAAHGTVTRHYRMHQQG 304
+S L GRT+E AH R+YR H +G
Sbjct: 306 SSTLRNVHGRTLERLLAHRQSVRNYRRHSRG 336
>SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 848
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 252 DSTVRPSGHISTDVIIPSEP*PCATTSDCTS 160
+ T + GH+ D+I P + PC CTS
Sbjct: 559 ECTDKYGGHLCRDIIDPCQRNPCLNGGHCTS 589
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,216,425
Number of Sequences: 59808
Number of extensions: 517918
Number of successful extensions: 1602
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1590
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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