Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_F17
         (623 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical pr...   272   1e-73
Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical pr...   256   7e-69
Z71266-7|CAA95845.1|  987|Caenorhabditis elegans Hypothetical pr...    30   1.5  
U40029-9|AAN65325.1|  727|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U50312-1|AAA92318.1|  285|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U23484-6|AAK93845.1|  641|Caenorhabditis elegans Pink (pten-indu...    28   4.7  
AF016417-2|AAB65279.2|  533|Caenorhabditis elegans Hypothetical ...    28   6.2  

>Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical
           protein C34F6.8 protein.
          Length = 435

 Score =  272 bits (667), Expect = 1e-73
 Identities = 120/181 (66%), Positives = 142/181 (78%), Gaps = 1/181 (0%)
 Frame = +2

Query: 2   RFKDIFEEVYQSDYKKQFDDAKIWYEHRLIDDMVAQAIKGSGGFVWACKNYDGDVQSDVV 181
           RFKDIF+++Y+  Y+  F + KIWYEHRLIDD VAQA+K SGGFVWACKNYDGDVQSD+V
Sbjct: 244 RFKDIFQDIYEKKYEADFKNNKIWYEHRLIDDQVAQALKSSGGFVWACKNYDGDVQSDIV 303

Query: 182 AQGYGSLGMMTSVLMCPDGRTVESEAAHGTVTRHYRMHQQGKPTSTNPVASIYAWTRGLV 361
           AQGYGSLG+M+SVLMCPDG+T+E+EAAHGTVTRHYR HQ+G  TSTNP+ASI+AWTRGL 
Sbjct: 304 AQGYGSLGLMSSVLMCPDGKTIEAEAAHGTVTRHYREHQKGNSTSTNPIASIFAWTRGLH 363

Query: 362 HRAKLDGTPXXXXXXXXXXXXCVECIDSGKMTKDLVICIHGL-ANTKEGMYLNTEDFLQA 538
           HR  LD               C++ ++ GKMTKDL ICIHG    T++G YL TEDFL A
Sbjct: 364 HRGVLDNNEALKTFSLTLEKACIDTVEEGKMTKDLSICIHGTKKGTEKGAYLITEDFLSA 423

Query: 539 I 541
           I
Sbjct: 424 I 424


>Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical
           protein F59B8.2 protein.
          Length = 412

 Score =  256 bits (628), Expect = 7e-69
 Identities = 118/189 (62%), Positives = 143/189 (75%), Gaps = 2/189 (1%)
 Frame = +2

Query: 2   RFKDIFEEVYQSDYKKQFDDAKIWYEHRLIDDMVAQAIKGSGGFVWACKNYDGDVQSDVV 181
           RFKDIF E+Y  +Y+ +F  A IWYEHRLIDDMVAQA+K  GGFVWACKNYDGDVQSD V
Sbjct: 222 RFKDIFAEIYP-EYEAEFKAAGIWYEHRLIDDMVAQAMKSDGGFVWACKNYDGDVQSDSV 280

Query: 182 AQGYGSLGMMTSVLMCPDGRTVESEAAHGTVTRHYRMHQQGKPTSTNPVASIYAWTRGLV 361
           AQGYGSLG+MTSVL+CPDG+TVE+EAAHGTVTRHYRMHQ+G+ TSTNP+ASI+AW+RGL 
Sbjct: 281 AQGYGSLGLMTSVLVCPDGKTVEAEAAHGTVTRHYRMHQKGQETSTNPIASIFAWSRGLA 340

Query: 362 HRAKLDGTPXXXXXXXXXXXXCVECIDSGKMTKDLVICIHG--LANTKEGMYLNTEDFLQ 535
           HRA LD               C+E +++G +TKDL IC+ G   +      YLNT +FL 
Sbjct: 341 HRATLDKNSALETFANNLEAVCIETMEAGFLTKDLAICVKGGNASAVTRTDYLNTFEFLD 400

Query: 536 AIADQLERK 562
            +A+ L +K
Sbjct: 401 KLAENLAKK 409


>Z71266-7|CAA95845.1|  987|Caenorhabditis elegans Hypothetical
           protein R06C7.8 protein.
          Length = 987

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +2

Query: 2   RFKDIFEEVYQSDYKKQFDDAKIWYEHRLID 94
           ++KD F E    DY+K+ D   ++ +H++ID
Sbjct: 228 KWKDTFGEDVDDDYRKRKDSGVVFVKHQVID 258


>U40029-9|AAN65325.1|  727|Caenorhabditis elegans Hypothetical
           protein F10G7.9a protein.
          Length = 727

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -1

Query: 362 EPNPSSKRISRRRGSWTSASLVGACDSAESRCRERLQTPPS 240
           +P PS K +S   G +    L+      E+   ++++TPPS
Sbjct: 14  DPEPSPKPVSPSPGDFNDEDLIDQIVQKENEIAQKVKTPPS 54


>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
            K10C2.1 protein.
          Length = 2314

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 21/58 (36%), Positives = 29/58 (50%)
 Frame = -3

Query: 276  VTVP*AASDSTVRPSGHISTDVIIPSEP*PCATTSDCTSPS*FLQAHTNPPDPFIACA 103
            VT+P   S +T  P+G I T V + S P   A +S   +PS   Q+    P P +A A
Sbjct: 2202 VTLP-PPSVATAGPTGPILTVVPVSSAPTSGAVSSTTNTPSPTNQSPVTLPPPSVATA 2258


>U50312-1|AAA92318.1|  285|Caenorhabditis elegans Hypothetical
           protein B0222.1 protein.
          Length = 285

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 31/111 (27%), Positives = 44/111 (39%), Gaps = 8/111 (7%)
 Frame = -1

Query: 365 GEPNPSSKRISRRRGSWTSASLVGACDSAESRCRERLQTPPSVRQDTSVLTSSFPANRNP 186
           G    S  R S    S +S+   G+  S+ S  R    T  S R   +  +S+F  N   
Sbjct: 27  GGRGSSGARSSSSSFSSSSSRSSGSSFSSSSSSRPTSGTS-SYRSGNTQYSSNFRQN--- 82

Query: 185 ALLHRTARHRRNSYRPIRIHRILLSPVRP-----YHQ---SAYAHTKSLRH 57
            + H T+     SY P+    +++SPV P     YH      Y HT    H
Sbjct: 83  -VFHTTSTTTMFSYSPLTHTHVIISPVSPMIYGNYHYYWGGHYVHTPERPH 132


>U23484-6|AAK93845.1|  641|Caenorhabditis elegans Pink (pten-induced
           kinase) homologprotein 1 protein.
          Length = 641

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 20/76 (26%), Positives = 33/76 (43%)
 Frame = +2

Query: 23  EVYQSDYKKQFDDAKIWYEHRLIDDMVAQAIKGSGGFVWACKNYDGDVQSDVVAQGYGSL 202
           +V Q D K   D+  + Y+    DD + Q +    G   AC N+  D +SD V+ G  + 
Sbjct: 333 KVAQRDMKS--DNILLEYD---FDDEIPQLVVADFGCALACDNWQVDYESDEVSLGGNAK 387

Query: 203 GMMTSVLMCPDGRTVE 250
                +     G+ V+
Sbjct: 388 TKAPEIATAVPGKNVK 403


>AF016417-2|AAB65279.2|  533|Caenorhabditis elegans Hypothetical
           protein F17A9.2 protein.
          Length = 533

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 18/48 (37%), Positives = 21/48 (43%)
 Frame = -1

Query: 245 PSVRQDTSVLTSSFPANRNPALLHRTARHRRNSYRPIRIHRILLSPVR 102
           PS  Q  SVL S   A+  P   H          +P R HR+LL P R
Sbjct: 165 PSKPQPGSVLLSKLAAHLKPRY-HFAGLGVHYERQPYRNHRVLLEPAR 211


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,240,501
Number of Sequences: 27780
Number of extensions: 353922
Number of successful extensions: 886
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)