Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_F16
         (619 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   3.6  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    22   4.7  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   6.3  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   6.3  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   8.3  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 137 SHLDRIVFIHRVITERF 87
           S+LD+  FIHR + + F
Sbjct: 330 SNLDKDAFIHRTVDDYF 346


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 12/58 (20%), Positives = 26/58 (44%)
 Frame = -2

Query: 501 AVVSVNNRFTPFTSDGECVTDHAPLRLLVEGHNLSEIVNESNEVEPIIVRMVLTDPLR 328
           A+ + NN+     +      +    + ++E    + I N  NE++ +I+  +  DP R
Sbjct: 14  AIPTTNNQIEMAAATKRVSDNRRSNKPIMEKRRRARINNSLNELKTLILDAMKKDPAR 71


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +1

Query: 244 DALIKLNDLVDESDPDTNLPNIVHAFQTAERIREDHPDDD 363
           DAL+  +D  ++ + D      +H    +ER  +D  DDD
Sbjct: 161 DALVSDSDDREKDEEDKRDDTDMHGRIKSERNGKDLDDDD 200


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = -3

Query: 155 IIGFTDSHLDRIVFIHRVITERFQRFVLVFL 63
           ++G++ ++    +F++  I   F  FVLVF+
Sbjct: 112 LLGYSINYRRISIFVNLAILGVFGEFVLVFV 142


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 31  LWTRRFYSDQRRNTR 75
           LWTRR Y+ +++ +R
Sbjct: 60  LWTRRRYAGRKKLSR 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,112
Number of Sequences: 336
Number of extensions: 3421
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)