Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_F16
         (619 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF038609-3|AAU87825.1|  193|Caenorhabditis elegans Hypothetical ...   192   2e-49
U41272-3|ABM01866.1|  186|Caenorhabditis elegans Hypothetical pr...    30   1.2  
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p...    30   1.2  
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p...    30   1.2  
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p...    30   1.2  
AL032654-5|CAD91715.2|  516|Caenorhabditis elegans Hypothetical ...    30   1.2  
AL032654-4|CAA21721.2|  552|Caenorhabditis elegans Hypothetical ...    30   1.2  
AF016452-9|AAO26003.1|  494|Caenorhabditis elegans Aldehyde dehy...    29   2.0  
AF016452-8|AAM45357.1|  493|Caenorhabditis elegans Aldehyde dehy...    29   2.0  
AF016452-7|AAB66022.2|  493|Caenorhabditis elegans Aldehyde dehy...    29   2.0  
AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical...    28   4.6  
AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical ...    28   4.6  
Z66567-6|CAA91490.2|  281|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>AF038609-3|AAU87825.1|  193|Caenorhabditis elegans Hypothetical
           protein C54E4.5 protein.
          Length = 193

 Score =  192 bits (468), Expect = 2e-49
 Identities = 82/148 (55%), Positives = 102/148 (68%)
 Frame = +1

Query: 175 TVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNIVHAFQTAERIREDHP 354
           TVDFVK     WLKF+H K  I   L  L   +DESDPD +  N++HA+QTAE+IRE+HP
Sbjct: 43  TVDFVKEMHQKWLKFDHAKMPILGCLDMLATFLDESDPDVDEANLIHAYQTAEKIRENHP 102

Query: 355 DDDWFHLIGLIHDLGKVMAFYEEPQWCVVGDTFAVGCKWGKSIVYGDDSFKDNPDTYNPK 534
           D  W HL GLIHDLGK+M+ + E QW V GDT+ VGC    SIVYG  SF  NPD  +P 
Sbjct: 103 DKPWMHLAGLIHDLGKIMSVWGEEQWAVTGDTYPVGCAPAASIVYGKSSFDGNPDISHPV 162

Query: 535 YNTEYGMYEPNCGLENXMVSWGHDEYLY 618
           Y T+ GMY+  CG+EN +++W HDEY+Y
Sbjct: 163 YGTQMGMYQEKCGMENLLMTWSHDEYMY 190



 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 87  EAFRDYTVDENDPIKMRVRKTYYDMH 164
           + +R Y V   DPI++RVR  Y+  H
Sbjct: 14  KTYRIYDVKAEDPIQVRVRTHYFTQH 39


>U41272-3|ABM01866.1|  186|Caenorhabditis elegans Hypothetical
           protein T03G11.10 protein.
          Length = 186

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
 Frame = +1

Query: 115 KTIRSRCESVKPIMICTRTCTVD----FVKGKMDNWLKF 219
           K IRS C  VK    C R+C+ D     +   MD W KF
Sbjct: 46  KQIRSLCTRVKSWETCVRSCSRDNARAILLSSMDQWKKF 84


>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
            protein K07E12.1b protein.
          Length = 12268

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 21/72 (29%), Positives = 32/72 (44%)
 Frame = +1

Query: 139  SVKPIMICTRTCTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNIVHA 318
            +V+P+   T TCT   V     +W+K N    T+  A ++L DLV ++       N    
Sbjct: 1152 TVEPLGAATITCTATGVPQPKVHWIKAN--GETVDSATLQLYDLVKDTSATCVAENNAGK 1209

Query: 319  FQTAERIREDHP 354
             Q A  I+   P
Sbjct: 1210 TQEAVSIQVTGP 1221


>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
            protein K07E12.1a protein.
          Length = 13100

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 21/72 (29%), Positives = 32/72 (44%)
 Frame = +1

Query: 139  SVKPIMICTRTCTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNIVHA 318
            +V+P+   T TCT   V     +W+K N    T+  A ++L DLV ++       N    
Sbjct: 1215 TVEPLGAATITCTATGVPQPKVHWIKAN--GETVDSATLQLYDLVKDTSATCVAENNAGK 1272

Query: 319  FQTAERIREDHP 354
             Q A  I+   P
Sbjct: 1273 TQEAVSIQVTGP 1284


>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
            protein.
          Length = 13100

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 21/72 (29%), Positives = 32/72 (44%)
 Frame = +1

Query: 139  SVKPIMICTRTCTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNIVHA 318
            +V+P+   T TCT   V     +W+K N    T+  A ++L DLV ++       N    
Sbjct: 1215 TVEPLGAATITCTATGVPQPKVHWIKAN--GETVDSATLQLYDLVKDTSATCVAENNAGK 1272

Query: 319  FQTAERIREDHP 354
             Q A  I+   P
Sbjct: 1273 TQEAVSIQVTGP 1284


>AL032654-5|CAD91715.2|  516|Caenorhabditis elegans Hypothetical
           protein Y52B11A.3b protein.
          Length = 516

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +1

Query: 331 ERIREDHPDDDWFHLIGLIHDLGKVMAFY 417
           E ++ +  DD W HL G+++D+ K + F+
Sbjct: 25  ELMKHNTKDDCWVHLFGIVYDVTKYLDFH 53


>AL032654-4|CAA21721.2|  552|Caenorhabditis elegans Hypothetical
           protein Y52B11A.3a protein.
          Length = 552

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +1

Query: 331 ERIREDHPDDDWFHLIGLIHDLGKVMAFY 417
           E ++ +  DD W HL G+++D+ K + F+
Sbjct: 61  ELMKHNTKDDCWVHLFGIVYDVTKYLDFH 89


>AF016452-9|AAO26003.1|  494|Caenorhabditis elegans Aldehyde
           dehydrogenase protein4, isoform c protein.
          Length = 494

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +1

Query: 115 KTIRSRCESVKPIMICTRTCTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLVDESDP 288
           K +R R ES + + I      +D+    +D+W+K  H + T   AL K    V E DP
Sbjct: 49  KDLRRRHESTEILEIGMTIQEIDYFLKNIDDWVKPTHVEKTFTTALDK---PVIEKDP 103


>AF016452-8|AAM45357.1|  493|Caenorhabditis elegans Aldehyde
           dehydrogenase protein4, isoform b protein.
          Length = 493

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +1

Query: 115 KTIRSRCESVKPIMICTRTCTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLVDESDP 288
           K +R R ES + + I      +D+    +D+W+K  H + T   AL K    V E DP
Sbjct: 49  KDLRRRHESTEILEIGMTIQEIDYFLKNIDDWVKPTHVEKTFTTALDK---PVIEKDP 103


>AF016452-7|AAB66022.2|  493|Caenorhabditis elegans Aldehyde
           dehydrogenase protein4, isoform a protein.
          Length = 493

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +1

Query: 115 KTIRSRCESVKPIMICTRTCTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLVDESDP 288
           K +R R ES + + I      +D+    +D+W+K  H + T   AL K    V E DP
Sbjct: 49  KDLRRRHESTEILEIGMTIQEIDYFLKNIDDWVKPTHVEKTFTTALDK---PVIEKDP 103


>AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical
           protein Y18D10A.13 protein.
          Length = 2417

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -2

Query: 450 CVTDHAPLRLLVEGHNLSEIVNESNEVEPIIVR-MVLTDPLRCLESVHNVRQVSV 289
           C       RLLVE H+   +   S++VE I+V+ +  TD L C E+     ++ V
Sbjct: 797 CTEQQRLARLLVELHSRRPL-EASSDVESIVVQSLTSTDDLVCSEAARTFHRIWV 850


>AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical
           protein protein.
          Length = 2417

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -2

Query: 450 CVTDHAPLRLLVEGHNLSEIVNESNEVEPIIVR-MVLTDPLRCLESVHNVRQVSV 289
           C       RLLVE H+   +   S++VE I+V+ +  TD L C E+     ++ V
Sbjct: 797 CTEQQRLARLLVELHSRRPL-EASSDVESIVVQSLTSTDDLVCSEAARTFHRIWV 850


>Z66567-6|CAA91490.2|  281|Caenorhabditis elegans Hypothetical
           protein ZK455.5 protein.
          Length = 281

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
 Frame = +1

Query: 205 NWL-KFNHFKSTIKDALIKLNDLVDESDPDTNLPNIVHAFQTAERIRED-HPDDDWFHLI 378
           NWL    H K   +++ I   D    S      PN+         +++  +  D ++ L 
Sbjct: 78  NWLCNTKHLKGVHENSYIVTLDEESSSALKKTWPNVNQVNIVVPGLKDSFNYGDGYYQLF 137

Query: 379 GLIH-DLGKVMAFYEEPQWCVVGDTF 453
            L   +L + +  Y +P W +  DTF
Sbjct: 138 YLFRANLARAILHYNKPFWMIQQDTF 163


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,751,112
Number of Sequences: 27780
Number of extensions: 319208
Number of successful extensions: 945
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)