Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_F16
         (619 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    22   4.2  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   4.2  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    22   4.2  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   4.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   5.5  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   5.5  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   7.3  

>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 499 SFKDNPDTYNPKYNTEY 549
           ++ +N + YN  YNT Y
Sbjct: 93  NYNNNYNNYNNNYNTNY 109


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +1

Query: 472 GKSIVYGDDSFKDNPDTYNPKYNTEYGMYEPNCGL 576
           G ++V+  D    NP   N  Y   Y +    C L
Sbjct: 336 GNTLVFLFDLIGRNPTVQNKLYEETYALAPAGCDL 370


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -2

Query: 420 LVEGHNLSEIVNESNE 373
           ++ G  L+EI+NE++E
Sbjct: 45  IINGKKLTEIINETHE 60


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +1

Query: 478 SIVYGD--DSFKDNPDTYNPKYNTEYGM 555
           S+V+ D  D+ +DNP     KY+  Y M
Sbjct: 301 SLVFVDNHDTQRDNPQILTYKYSKRYKM 328


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +1

Query: 133  CESVKPIMICTRTCTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLVDE-SDPD 291
            C +++P++ C   CT    K K     KF+  +    +A +KL   +++ ++PD
Sbjct: 1702 CFTMRPVVSCASGCTAVETKSKP---YKFHCMEK--NEAAMKLKKRIEKGANPD 1750



 Score = 21.0 bits (42), Expect = 9.6
 Identities = 18/71 (25%), Positives = 29/71 (40%)
 Frame = +1

Query: 244  DALIKLNDLVDESDPDTNLPNIVHAFQTAERIREDHPDDDWFHLIGLIHDLGKVMAFYEE 423
            D   KLN+ +D++D   N P +   F+  +        +D         DL     FYE+
Sbjct: 1383 DVRAKLNEYLDKADVIVNTPIMDAHFKDVKLSDFGFSTEDILDTAD--EDLLINNVFYED 1440

Query: 424  PQWCVVGDTFA 456
               C++  T A
Sbjct: 1441 ETSCMLDKTRA 1451


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 11  TRIPGVRYGPVASTPTRG 64
           T + GV Y PV  TP+ G
Sbjct: 838 TTMAGVIYPPVIGTPSTG 855


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/19 (36%), Positives = 16/19 (84%)
 Frame = +1

Query: 226 FKSTIKDALIKLNDLVDES 282
           FK+  ++ LIK++D+++E+
Sbjct: 221 FKNLPEETLIKISDVLEET 239


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,298
Number of Sequences: 438
Number of extensions: 3803
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)