Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_F15
         (308 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    44   5e-07
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    42   1e-06
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   3.9  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 43.6 bits (98), Expect = 5e-07
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
 Frame = +2

Query: 29  KIFLGPKYNDNGFPITLEENWHKFYELDWFTHKITPGQNKIVRNSNEFSLFKEDSLPLTD 208
           +IFL P++++ G P         F ELD F   +  G N I R+S E SL    ++P   
Sbjct: 500 RIFLAPQFDERGNPWLFRNQKDMFIELDRFAVSLKQGTNTITRHSTESSL----TIPFER 555

Query: 209 LMKLLDEGKVP--LYMSEGFEC---MPNRLMLPRGTE 304
             + LD  +      +SE   C    P  ++LP+GTE
Sbjct: 556 TFRNLDANRPTGGDALSEFNFCGCGWPQHMLLPKGTE 592


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 42.3 bits (95), Expect = 1e-06
 Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
 Frame = +2

Query: 29  KIFLGPKYNDNGFPITLEENWHKFYELDWFTHKITPGQNKIVRNSNEFSLFKEDSLPLTD 208
           +IFL PK ++ G P    +    F ELD FT  +  GQN I R S++ S+         +
Sbjct: 501 RIFLAPKTDERGNPWLFRDQKIMFIELDKFTVNLKQGQNTITRASSQSSVTIPFERTFRN 560

Query: 209 LMKLLDEGKVPLYMSEGFEC-MPNRLMLPRGT 301
           L     +G   L       C  P  +++P+GT
Sbjct: 561 LDLNRPQGGEELAQFNFCGCGWPQHMLIPKGT 592


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 191 SLPLTDLMKLLDEG 232
           SLPLTD ++LL  G
Sbjct: 237 SLPLTDQVQLLRAG 250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,221
Number of Sequences: 336
Number of extensions: 1570
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5624413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)