Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_F15
         (308 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar...    28   0.37 
SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|c...    26   1.1  
SPCC1183.08c |rpl101|rpl1-1, rpl10a-1|60S ribosomal protein L10a...    26   1.5  
SPAC589.06c |||pho88 family protein|Schizosaccharomyces pombe|ch...    26   1.5  
SPAC30D11.06c |||DUF300 family protein|Schizosaccharomyces pombe...    25   1.9  
SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein L10...    25   3.4  
SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Ma...    25   3.4  
SPBC21C3.11 |ubx4||UBX domain protein Ubx4 |Schizosaccharomyces ...    24   4.5  
SPAC1610.01 ||SPAC17A5.17|conserved fungal protein|Schizosacchar...    24   5.9  
SPBC1604.20c |tea2|klp4|kinesin-like protein Tea2|Schizosaccharo...    24   5.9  
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos...    23   7.9  
SPAC16A10.02 |||transcription coactivator Sub1 |Schizosaccharomy...    23   7.9  
SPAC644.12 |cdc5||cell division control protein Cdc5|Schizosacch...    23   7.9  

>SPAC26A3.09c |rga2||GTPase activating protein
           Rga2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1275

 Score = 27.9 bits (59), Expect = 0.37
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +2

Query: 98  FYELDWFTHKITPGQNKIVRNSNE--FSLFKEDSLPLTDLMKLLD 226
           F  LDWFT+  +  QN+++R S +  F    +  L L   +KLL+
Sbjct: 654 FPTLDWFTNDSSVIQNELLRRSVDTYFRYIFQTDLKLEQRIKLLE 698


>SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 796

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 26  IKIFLGPKYNDNGFPITLEENWHKFYELDWFTHKIT 133
           + I L P  ND  +  T    WHKF++  WF   +T
Sbjct: 416 LHIELAPAANDIQWHNTYIGRWHKFFQ-GWFITLVT 450


>SPCC1183.08c |rpl101|rpl1-1, rpl10a-1|60S ribosomal protein
           L10a|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 216

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 240 GTFPSSNNFMRSVNGKESSLKSENSFELRTILFCPGV 130
           G FPS  +    + GK + +KS   F+L+ +L C GV
Sbjct: 131 GKFPSPVSHADDLYGKITEVKSTIKFQLKKVL-CLGV 166


>SPAC589.06c |||pho88 family protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 202

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -3

Query: 279 LFGMHSKPSDIYNGTFPSSNNFMRSVNGKESSLKSENSFE 160
           LFG  +KP+    GT  +SNN     +G   +  +EN  E
Sbjct: 160 LFGGGNKPAAAVTGTSSNSNNASAKSDGPTITELNENETE 199


>SPAC30D11.06c |||DUF300 family protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 426

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +3

Query: 45  LSTTIMDSPSHWKKTGINSTNWIG 116
           LS   +   S+W++T ++ TNW+G
Sbjct: 208 LSVKAIIFASYWQQTVLSITNWLG 231


>SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein
           L10a|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 216

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -3

Query: 240 GTFPSSNNFMRSVNGKESSLKSENSFELRTILFCPGV 130
           G FPS  +    + GK   +KS   F+L+ +L C GV
Sbjct: 131 GKFPSPVSHSDDLYGKIIEVKSTIKFQLKKVL-CLGV 166


>SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 963

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 20  AVIKIFLGPKYNDNGFPIT 76
           A+ K+ L  KYN N FP T
Sbjct: 663 AISKVSLNMKYNSNYFPTT 681


>SPBC21C3.11 |ubx4||UBX domain protein Ubx4 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 425

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = -3

Query: 255 SDIYNGTFPSSNNFMRSVNGKESSLKSENSFELRTILFCPGVILCVNQSSS 103
           S I NG          + +GK SS  S  S +++  L  PG    ++++SS
Sbjct: 60  SGIINGAKLIVKESATNQSGKSSSSISPQSKKIKVALQLPGAARIIDEASS 110


>SPAC1610.01 ||SPAC17A5.17|conserved fungal
           protein|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 217

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 72  MGNPLSLYLGPKKILITA 19
           MGNP+SL+  P    +TA
Sbjct: 174 MGNPMSLFFDPNHQWVTA 191


>SPBC1604.20c |tea2|klp4|kinesin-like protein
           Tea2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 628

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -3

Query: 282 NLFGMHSKPSDIYNGTFPS-SNNFMRSVNG 196
           N+FGM SK  DIY  +  S   N     NG
Sbjct: 183 NVFGMESKNYDIYKRSVKSVVRNVFSGYNG 212


>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 855

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +2

Query: 146 KIVRNSNEFSLFKEDSLPLTDLMKLLDEGKVPLYMSEGFECMPNRLM 286
           K  +++ + S  KED   ++DL K+  + K  L      E +  RLM
Sbjct: 20  KFDKSTTDESSSKEDYSTMSDLWKMFSKAKSELSNGRRVENLTWRLM 66


>SPAC16A10.02 |||transcription coactivator Sub1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 136

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +2

Query: 95  KFYELDWFTHKITPGQNKIVRNSNEFSLFKEDSLPLTDLMKLLDEG 232
           ++YE D     + PG+  I  N NE+   K+    + D + L+D G
Sbjct: 55  EYYEKDG---DMLPGKKGIALNINEWKKLKQLIHEVDDSLGLVDSG 97


>SPAC644.12 |cdc5||cell division control protein
           Cdc5|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 757

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = +2

Query: 140 QNKIVRNSNEFSLFKEDSLPL 202
           +N+++RN  + SL  ++S+PL
Sbjct: 386 RNQLMRNREQSSLLGQESIPL 406


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,389,623
Number of Sequences: 5004
Number of extensions: 28184
Number of successful extensions: 99
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 99
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 79841814
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)