Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_F15
         (308 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117204-16|CAB55130.1|  389|Caenorhabditis elegans Hypothetical...    29   0.87 
AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical ...    28   1.5  
U53146-1|AAA96111.1|  348|Caenorhabditis elegans Hypothetical pr...    27   2.7  
AL132860-13|CAB60509.1|  292|Caenorhabditis elegans Hypothetical...    27   2.7  
AC087081-18|AAK66030.1|  124|Caenorhabditis elegans Hypothetical...    27   2.7  
AC024696-1|AAK84516.1|  348|Caenorhabditis elegans Hypothetical ...    27   2.7  
U28928-1|AAA68334.3|  589|Caenorhabditis elegans Anchor cell fus...    27   3.5  
EF205023-1|ABP04049.1|  589|Caenorhabditis elegans anchor cell f...    27   3.5  
AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical ...    26   4.7  
Z81542-1|CAB04414.1|  379|Caenorhabditis elegans Hypothetical pr...    25   8.1  
Z73423-2|CAA97774.1|  290|Caenorhabditis elegans Hypothetical pr...    25   8.1  
U49830-12|AAL16311.1|  363|Caenorhabditis elegans Hypothetical p...    25   8.1  
AC006775-1|AAF60622.2|  551|Caenorhabditis elegans Hypothetical ...    25   8.1  

>AL117204-16|CAB55130.1|  389|Caenorhabditis elegans Hypothetical
           protein Y116A8C.25 protein.
          Length = 389

 Score = 28.7 bits (61), Expect = 0.87
 Identities = 12/48 (25%), Positives = 25/48 (52%)
 Frame = +2

Query: 80  EENWHKFYELDWFTHKITPGQNKIVRNSNEFSLFKEDSLPLTDLMKLL 223
           E +W + +E  +  H++ P  ++++   N+  LF+   +  T   KLL
Sbjct: 150 ENDWTETWEEFFIRHRLKPQIDRLIETHNDRQLFELSEILYTKTAKLL 197


>AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical
           protein K10B4.1 protein.
          Length = 1210

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
 Frame = +2

Query: 8   IATDAVIKIFLGPKYNDNGFPITLEENWHKFYELDWFTHKITPGQNKIVRNSNEFSLF-- 181
           IA + V    LGP +   G  + L+    KF +  W+T+K+T  Q + V+ ++  ++   
Sbjct: 452 IAENPVYGSLLGPTF---GCIMALQFQKTKFGDTYWYTNKLTEDQLEEVKKTSISAMMCR 508

Query: 182 -KEDSLPLTDLMKLLDE-GKVPLYMSEGFECMPN 277
            ++ S+   D+ K  D    +P++ +      P+
Sbjct: 509 HQKTSIIQKDVFKAADNFQNIPIFCNSSVFAKPD 542


>U53146-1|AAA96111.1|  348|Caenorhabditis elegans Hypothetical
           protein ZC411.1 protein.
          Length = 348

 Score = 27.1 bits (57), Expect = 2.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 285 INLFGMHSKPSDIYNGTFPSSNNFMRSVNG 196
           INL      P  ++ GT+  + NF++ V G
Sbjct: 235 INLLTGQKPPETVFQGTYVETRNFLKIVRG 264


>AL132860-13|CAB60509.1|  292|Caenorhabditis elegans Hypothetical
           protein Y56A3A.15 protein.
          Length = 292

 Score = 27.1 bits (57), Expect = 2.7
 Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
 Frame = +2

Query: 2   SDIATDAVIKIFLGPKYNDNGF---PITLEENWHKFYELDWFTHKITPGQNKIVRNSNEF 172
           S+I +  ++++F  P  ++ G    PI  +   H FY L++F  K+T   + +V N ++F
Sbjct: 152 SEIQSSHLLELF--PSLSNLGVYNVPINTQILTHNFYWLEFFKTKVTL-DDILVSNCSKF 208

Query: 173 SLFKEDSLPLTDL 211
           S+ + ++LP  +L
Sbjct: 209 SI-EYNNLPDKEL 220


>AC087081-18|AAK66030.1|  124|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.1 protein.
          Length = 124

 Score = 27.1 bits (57), Expect = 2.7
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -2

Query: 139 PRSYLVREPIQFVEFMPVFFQCDGESIIVV 50
           P+S L+R+PIQ V+   V   CDGE+ + +
Sbjct: 93  PQS-LLRKPIQIVDDCSVKMYCDGEAKLFI 121


>AC024696-1|AAK84516.1|  348|Caenorhabditis elegans Hypothetical
           protein F07B7.7 protein.
          Length = 348

 Score = 27.1 bits (57), Expect = 2.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 285 INLFGMHSKPSDIYNGTFPSSNNFMRSVNG 196
           INL      P  ++ GT+  + NF++ V G
Sbjct: 235 INLLTGQKPPETVFQGTYVETRNFLKIVRG 264


>U28928-1|AAA68334.3|  589|Caenorhabditis elegans Anchor cell fusion
           failure protein1 protein.
          Length = 589

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -3

Query: 255 SDIYNGTFPSSNNFMRSVNGKESS 184
           +D YN    S NNF+RSV   ESS
Sbjct: 335 NDTYNERRVSDNNFVRSVKVDESS 358


>EF205023-1|ABP04049.1|  589|Caenorhabditis elegans anchor cell
           fusion failure-1 protein.
          Length = 589

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -3

Query: 255 SDIYNGTFPSSNNFMRSVNGKESS 184
           +D YN    S NNF+RSV   ESS
Sbjct: 335 NDTYNERRVSDNNFVRSVKVDESS 358


>AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical
           protein Y43D4A.5 protein.
          Length = 1648

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 188 DSLPLTDLMKLLDEGKVPLYMSEG 259
           D+LP T+L +  D+ K+P Y   G
Sbjct: 429 DALPATNLFRYPDQVKIPFYSPTG 452


>Z81542-1|CAB04414.1|  379|Caenorhabditis elegans Hypothetical
           protein F49A5.2 protein.
          Length = 379

 Score = 25.4 bits (53), Expect = 8.1
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = -3

Query: 291 GNINLFGMHSKPSDIY--NGTFPSSNNFMRSVNG 196
           G I L  M     DIY  +G+ P  NN  R++NG
Sbjct: 299 GYIQLGAMLLSSDDIYWLDGSLPVYNNIKRTLNG 332


>Z73423-2|CAA97774.1|  290|Caenorhabditis elegans Hypothetical
           protein C03A3.3 protein.
          Length = 290

 Score = 25.4 bits (53), Expect = 8.1
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 51  TTIMDSPSHWKKTGINSTNWIGSRTR*LLG 140
           T +MDS  HW+      T W+    + +LG
Sbjct: 110 TRLMDSSWHWEIETYKVTRWLNDGDKIILG 139


>U49830-12|AAL16311.1|  363|Caenorhabditis elegans Hypothetical
           protein C33F10.13 protein.
          Length = 363

 Score = 25.4 bits (53), Expect = 8.1
 Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
 Frame = +2

Query: 44  PKYNDNGFP--ITLEENWHKFYELDWFTHKITPGQNKIVRNSNEFSLFKEDSLPLTDLMK 217
           P ++    P  ++L E     ++  +F+ K+   +  + +N +  SL  EDS+PLTDL+ 
Sbjct: 184 PPFSSQSLPDLLSLTEQISFNFDSSYFS-KLEKFKEIVSKNLSYLSL--EDSIPLTDLLI 240

Query: 218 L 220
           L
Sbjct: 241 L 241


>AC006775-1|AAF60622.2|  551|Caenorhabditis elegans Hypothetical
           protein Y46H3B.2 protein.
          Length = 551

 Score = 25.4 bits (53), Expect = 8.1
 Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = +1

Query: 127 DNSWAKQDCT-QLKRIFAFQ 183
           DNSW   DC  QL  I AFQ
Sbjct: 524 DNSWVNTDCNKQLYSICAFQ 543


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,505,337
Number of Sequences: 27780
Number of extensions: 151133
Number of successful extensions: 412
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 333802358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)