Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_F15
(308 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g17490.1 68416.m02234 F-box family protein similar to F-box p... 35 0.013
At3g17480.1 68416.m02233 F-box family protein contains F-box dom... 33 0.052
At2g23200.1 68415.m02771 protein kinase family protein contains ... 28 1.1
At3g61160.2 68416.m06845 shaggy-related protein kinase beta / AS... 27 1.9
At3g61160.1 68416.m06844 shaggy-related protein kinase beta / AS... 27 1.9
At2g02500.1 68415.m00189 expressed protein contains Pfam profile... 27 2.6
At1g71940.1 68414.m08316 expressed protein 27 2.6
At3g17620.1 68416.m02251 F-box family protein contains Pfam prof... 27 3.4
At3g13830.1 68416.m01746 F-box family protein contains Pfam:PF00... 27 3.4
At2g17220.2 68415.m01989 protein kinase, putative similar to pro... 27 3.4
At1g74580.1 68414.m08639 pentatricopeptide (PPR) repeat-containi... 27 3.4
At3g17530.1 68416.m02239 F-box family protein contains Pfam prof... 26 4.5
At3g16740.1 68416.m02137 F-box family protein contains F-box dom... 26 4.5
At3g03810.1 68416.m00391 expressed protein contains Pfam PF03138... 26 4.5
At1g32140.1 68414.m03954 F-box family protein contains F-box dom... 26 4.5
At5g46570.1 68418.m05734 protein kinase family protein contains ... 26 5.9
At5g44670.1 68418.m05473 expressed protein contains Pfam:PF01697... 26 5.9
At5g06580.1 68418.m00743 FAD linked oxidase family protein simil... 26 5.9
At3g16250.1 68416.m02050 ferredoxin-related contains Pfam profil... 26 5.9
At1g33610.1 68414.m04160 leucine-rich repeat family protein cont... 26 5.9
At1g29355.1 68414.m03589 expressed protein 26 5.9
At5g48620.1 68418.m06013 disease resistance protein (CC-NBS-LRR ... 25 7.8
At4g16560.1 68417.m02505 heat shock protein-related contains sim... 25 7.8
At4g16550.1 68417.m02504 heat shock protein-related contains sim... 25 7.8
At3g63140.1 68416.m07091 mRNA-binding protein, putative similar ... 25 7.8
At3g54550.1 68416.m06036 hypothetical protein contains Pfam prof... 25 7.8
At3g17540.1 68416.m02240 F-box family protein similar to hypothe... 25 7.8
At1g73680.1 68414.m08532 pathogen-responsive alpha-dioxygenase, ... 25 7.8
>At3g17490.1 68416.m02234 F-box family protein similar to F-box
protein family, AtFBX9 (GI:20197985) [Arabidopsis
thaliana]; contains Pfam PF00646: F-box domain and
TIGRFAM TIGR01640: F-box protein interaction domain
Length = 388
Score = 34.7 bits (76), Expect = 0.013
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -3
Query: 306 PSVPLG-NINLFGMHSKPSDIYNGTFPSSNNFMRSVNGKESSLKSENSFELRTILFCPGV 130
P LG + F ++S S+++ ++ + + GK SSL N FE+ I C G+
Sbjct: 51 PKTYLGLTLKDFRIYSMSSNLHGLLHNNNIDLLMEFKGKLSSLNDLNDFEISQIYPCDGL 110
Query: 129 ILC 121
ILC
Sbjct: 111 ILC 113
>At3g17480.1 68416.m02233 F-box family protein contains F-box domain
Pfam:PF00646
Length = 373
Score = 32.7 bits (71), Expect = 0.052
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 59 NGFPITLEENWHKFYELDWFTHKITPGQNKIVRNSNEFSLFKED 190
N T+ +W KF +D +TH+ G + N+ ++F ED
Sbjct: 286 NDITDTIVTSWSKFLRVDLYTHRFYNGVTFFIDEENKAAVFSED 329
>At2g23200.1 68415.m02771 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 834
Score = 28.3 bits (60), Expect = 1.1
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +2
Query: 2 SDIATDAVIKIFLGPKYNDNGFPITLEENWHKFYELDWFTHKITPGQNKIVRN---SNEF 172
S +A I++F P +D P ++N H Y L+ KITP + + R ++
Sbjct: 177 SSLALINAIEVFSAP--DDLEIPSASDKNLHTIYRLNVGGEKITPDNDTLGRTWLPDDDD 234
Query: 173 SLFKEDS 193
L+++DS
Sbjct: 235 FLYRKDS 241
>At3g61160.2 68416.m06845 shaggy-related protein kinase beta /
ASK-beta (ASK2) identical to shaggy-related protein
kinase beta SP:O23145 GI:2569931 from [Arabidopsis
thaliana]
Length = 438
Score = 27.5 bits (58), Expect = 1.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 38 LGPKYNDNGFPITLEENWHKFY 103
+ P+YND FP + WHK +
Sbjct: 337 MNPRYNDFKFPQIKAQPWHKIF 358
>At3g61160.1 68416.m06844 shaggy-related protein kinase beta /
ASK-beta (ASK2) identical to shaggy-related protein
kinase beta SP:O23145 GI:2569931 from [Arabidopsis
thaliana]
Length = 431
Score = 27.5 bits (58), Expect = 1.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 38 LGPKYNDNGFPITLEENWHKFY 103
+ P+YND FP + WHK +
Sbjct: 330 MNPRYNDFKFPQIKAQPWHKIF 351
>At2g02500.1 68415.m00189 expressed protein contains Pfam profile:
PF01128 uncharacterized protein family UPF0007;
identical to GP:12697583 2-C-methyl-D-erythritol
4-phosphate cytidyltransferase {Arabidopsis thaliana};
identical to cDNA
4-Diphosphocytidyl-2C-methyl-D-erythritol synthase
(ISPD) GI:7385140
Length = 302
Score = 27.1 bits (57), Expect = 2.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 170 FSLFKEDSLPLTDLMKLLDEGKVPLYMSEG 259
F L K + L +TD + +++ K P+Y+S+G
Sbjct: 249 FELVKSEGLEVTDDVSIVEYLKHPVYVSQG 278
>At1g71940.1 68414.m08316 expressed protein
Length = 272
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 135 GVILCV-NQSSS*NLCQFSSNVMGNPLSLYLGPKKI 31
GV+L V N ++ C F S ++G PL +L P K+
Sbjct: 131 GVVLVVFNATAGATSCFFLSKLIGRPLITWLWPDKL 166
>At3g17620.1 68416.m02251 F-box family protein contains Pfam
profile: PF00646 F-box domain
Length = 398
Score = 26.6 bits (56), Expect = 3.4
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = -3
Query: 300 VPLGNINLFGMHSKPSDIYNGTFPSSNNFMRSVNGKESSLKSENSFELRTILFCPGVILC 121
V L +INL G+H NG PS N + V SL + ++ + C G++LC
Sbjct: 67 VYLTSINLRGIH-------NGFDPSINRQAKLV-----SLNGTDQIDISEVYHCDGLLLC 114
Query: 120 VNQ 112
+++
Sbjct: 115 ISK 117
>At3g13830.1 68416.m01746 F-box family protein contains Pfam:PF00646
F-box domain; contains TIGRFAM TIGR01640 : F-box protein
interaction domain
Length = 377
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/59 (25%), Positives = 32/59 (54%)
Frame = -3
Query: 204 VNGKESSLKSENSFELRTILFCPGVILCVNQSSS*NLCQFSSNVMGNPLSLYLGPKKIL 28
V+ + + + + FE+ + C G++LCV+ N +S+ VM ++YLG +++
Sbjct: 83 VDTSVNQISAFDDFEISQLFHCDGLLLCVS-----NKHYYSNTVM--VCNMYLGETRLI 134
>At2g17220.2 68415.m01989 protein kinase, putative similar to
protein kinase APK1A [Arabidopsis thaliana]
Swiss-Prot:Q06548
Length = 413
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 264 SKPSDIYNGTFPSSNNFMRSVNGKESSLKSENSFEL 157
S +I +GTF SSNN + + S++ S + F +
Sbjct: 18 SSTGNISSGTFKSSNNTTTTGTSRGSNISSNSGFSV 53
>At1g74580.1 68414.m08639 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile: PF01535 PPR repeat
Length = 763
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -3
Query: 249 IYNGTFPSSNNFMRSVNGKESSLKSENSFELRTILFCPGV 130
I G FP F ++G + LK EN+ E+ ++ GV
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV 492
>At3g17530.1 68416.m02239 F-box family protein contains Pfam
profile: PF00646 F-box domain
Length = 388
Score = 26.2 bits (55), Expect = 4.5
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -3
Query: 204 VNGKESSLKSENSFELRTILFCPGVILCVNQSSS 103
V GK L ++ I C G+ILC S+
Sbjct: 83 VTGKLIKLNDSKGVDISAIFHCDGLILCTTTEST 116
>At3g16740.1 68416.m02137 F-box family protein contains F-box domain
Pfam:PF00646
Length = 391
Score = 26.2 bits (55), Expect = 4.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 198 GKESSLKSENSFELRTILFCPGVILCVNQSSS 103
GK SL E+ ++ I C G++LC+ + S
Sbjct: 89 GKLISLDVEDHVDISKIFHCGGLLLCITKDIS 120
>At3g03810.1 68416.m00391 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown; previously annotated as
'auxin-independent growth promoter protein -related'
based on similarity to axi 1 protein (GB:X80301)
(GI:559920) from [Nicotiana tabacum], which, due to
scienitific fraud was retracted. Retraction in: Schell
J. EMBO J 1999 May 17;18(10):2908. PMID:10400497.
Length = 656
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 80 EENWHKFYELDWFTHKITPGQNKIVRNSNEFSLFK 184
EE + F + D K P K R NEF LFK
Sbjct: 149 EEQFIAFLKNDVIVMKTLPESLKAARKRNEFPLFK 183
>At1g32140.1 68414.m03954 F-box family protein contains F-box domain
Pfam:PF00646
Length = 591
Score = 26.2 bits (55), Expect = 4.5
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -3
Query: 171 NSFELRTILFCPGVILCVNQSSS 103
N E+ + +C G++LCV ++ S
Sbjct: 94 NQVEISKVFYCEGLLLCVTRNHS 116
>At5g46570.1 68418.m05734 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 489
Score = 25.8 bits (54), Expect = 5.9
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -3
Query: 270 MHSKPSDIYNGTFPSSNNFMRSVNGKESSLKSEN--SFELRTI 148
+HSK +++ + PS+ N SVNG + + +N FEL +
Sbjct: 4 LHSKTANLPSSDDPSAPNKPESVNGDQVDQEIQNFKEFELNEL 46
>At5g44670.1 68418.m05473 expressed protein contains Pfam:PF01697
Domain of unknown function
Length = 519
Score = 25.8 bits (54), Expect = 5.9
Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 89 WHKFYELDWFTHKITPGQ-NKIVRNSNEFSLFKEDSLPLTDLMKLLDEGKVPLYMSEGFE 265
W F+++D F + + ++ + E+S F + +P++ + +G Y GFE
Sbjct: 351 WMFFFDVDEFIYVPAKSSISSVMVSLEEYSQFTIEQMPMSSQLCYDGDGPARTYRKWGFE 410
Query: 266 CMPNR 280
+ R
Sbjct: 411 KLAYR 415
>At5g06580.1 68418.m00743 FAD linked oxidase family protein similar
to SP|Q12627 from Kluyveromyces lactis and SP|P32891
from Saccharomyces cerevisiae; contains Pfam FAD linked
oxidases, C-terminal domain PF02913, Pfam FAD binding
domain PF01565
Length = 567
Score = 25.8 bits (54), Expect = 5.9
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Frame = +2
Query: 11 ATDAVIK--IFLGPKYNDNGFPITLEENWHKFYELDWFTHKITPGQNKIVRNSNEFSLFK 184
+T+AV+K PK + LE+N Y+ +F K +K V N + +F
Sbjct: 94 STEAVVKGEYKQVPKELISQLKTILEDNLTTDYDERYFHGKPQNSFHKAV-NIPDVVVFP 152
Query: 185 EDSLPLTDLMKLLDEGKVPLYMSEGFECMPNRLMLPRG 298
++ ++K +E KVP+ G + + P+G
Sbjct: 153 RSEEEVSKILKSCNEYKVPIVPYGGATSIEGHTLAPKG 190
>At3g16250.1 68416.m02050 ferredoxin-related contains Pfam profile:
PF00111 2Fe-2S iron-sulfur cluster binding domains
Length = 204
Score = 25.8 bits (54), Expect = 5.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 288 NINLFGMHSKPSDIYNGTFPSSNNFMRSVNGKE 190
NI L+G +SKP G + + VNGKE
Sbjct: 106 NIELYGPYSKPLSNCAGVGTCATCMVEIVNGKE 138
>At1g33610.1 68414.m04160 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611
Length = 907
Score = 25.8 bits (54), Expect = 5.9
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 300 VPLGNINLFGMHSKP--SDIYNGTFPSSNNFMRSVNGKESSLKSENSFELRTI 148
VP+ NL + + ++ G FP ++S+NG ES S N F L+TI
Sbjct: 716 VPMSFTNLINITNLDLSHNLLTGPFP----VLKSINGIESLDLSYNKFHLKTI 764
>At1g29355.1 68414.m03589 expressed protein
Length = 307
Score = 25.8 bits (54), Expect = 5.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 249 IYNGTFPSSNNFMRSVNGKESSLKSENSFE 160
I+ G PS+N +N E +KSE ++E
Sbjct: 265 IHIGELPSANPENTEINASEMEIKSEETWE 294
>At5g48620.1 68418.m06013 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 908
Score = 25.4 bits (53), Expect = 7.8
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 85 KLA*ILRTG-LVHAQDNSWAKQDCTQLKRIFAFQRG 189
KL +L TG + D+ W K+D ++K +F +RG
Sbjct: 258 KLFQLLETGRYLLVLDDVWKKEDWDRIKAVFPRKRG 293
>At4g16560.1 68417.m02505 heat shock protein-related contains
similarity to SWISS-PROT:P31170 small heat shock
protein, chloroplast precursor [Arabidopsis thaliana]
Length = 532
Score = 25.4 bits (53), Expect = 7.8
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 308 HLQYLLATSIYLAC--IQNLQTYTTELFLRLITS*DRLTVKSPL 183
H +Y AT + C I N+Q + + +RLI S ++ ++ P+
Sbjct: 84 HRKYGTATGLICDCCEISNIQCFVGDGVVRLILSKQKINLRVPI 127
>At4g16550.1 68417.m02504 heat shock protein-related contains
similarity to Swiss-Prot:P31170 small heat shock
protein, chloroplast precursor [Arabidopsis thaliana]
Length = 743
Score = 25.4 bits (53), Expect = 7.8
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 308 HLQYLLATSIYLAC--IQNLQTYTTELFLRLITS*DRLTVKSPL 183
H +Y AT + C I N+Q + + +RLI S ++ ++ P+
Sbjct: 238 HRKYGTATGLICDCCEISNIQCFVGDGVVRLILSKQKINLRVPI 281
>At3g63140.1 68416.m07091 mRNA-binding protein, putative similar to
mRNA binding protein precursor (GI:26453355)
[Lycopersicon esculentum]
Length = 406
Score = 25.4 bits (53), Expect = 7.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 258 PSDIYNGTFPSSNNFMRSVNGKESSLKSENSFELRT 151
P ++ + PSS++ S++ SS S +F LRT
Sbjct: 25 PPSLHRFSLPSSSSSFSSLSSSSSSSSSLLTFSLRT 60
>At3g54550.1 68416.m06036 hypothetical protein contains Pfam profile
PF04720: Protein of unknown function (DUF506)
Length = 288
Score = 25.4 bits (53), Expect = 7.8
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -3
Query: 288 NINLFGMHSKPSDIYNGTFPSSNNFMRSVNGKESSLKSENSFELRTILFC 139
NIN GM P F + ++++ G +SSL ENS E+ C
Sbjct: 11 NINGVGMRQAPRSRLKRLFERPFS-LKNLAGVDSSLSRENSEEIEPSSVC 59
>At3g17540.1 68416.m02240 F-box family protein similar to
hypothetical protein GB:AAD18122 from [Arabidopsis
thaliana];contains Pfam PF00646: F-box domain; contains
TIGRFAM TIGR01640: F-box protein interaction domain
Length = 396
Score = 25.4 bits (53), Expect = 7.8
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = -3
Query: 276 FGMHSKPSDIYNGTFPSSNNFMRSVNGKESSLKSENSFELRTILFCPGVILCVNQSSS 103
FG++ D++ G S + + + K S+LK + I C G+ILC + ++
Sbjct: 64 FGVYKITDDLH-GILNSGDPSLEFTS-KLSNLKISEDLTITKIFHCDGLILCSTKENT 119
>At1g73680.1 68414.m08532 pathogen-responsive alpha-dioxygenase,
putative similar to pathogen-inducible alpha-dioxygenase
[Nicotiana attenuata] GI:12539609; contains Pfam profile
PF03098: Animal haem peroxidase
Length = 631
Score = 25.4 bits (53), Expect = 7.8
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +2
Query: 47 KYNDNGFPITLEENWHKFYELDWFTHKITPGQNKIVRNSNEFSLFKED-----SLPLTDL 211
K ND+G P +L E + Y + H + P + I+R+ N ++ KE+ +P+T+L
Sbjct: 360 KPNDHGVPYSLTEEFVSVYRM----HCLLP-ETLILRDMNSENVDKENPAIEREIPMTEL 414
Query: 212 M 214
+
Sbjct: 415 I 415
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,069,463
Number of Sequences: 28952
Number of extensions: 139883
Number of successful extensions: 481
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 12,070,560
effective HSP length: 70
effective length of database: 10,043,920
effective search space used: 321405440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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