Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_F13
(696 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 8e-12
SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 66 3e-11
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 52 4e-07
SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) 41 8e-04
SB_8405| Best HMM Match : PAN (HMM E-Value=0.044) 35 0.055
SB_37668| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_30230| Best HMM Match : CH (HMM E-Value=0.0035) 29 3.6
SB_29945| Best HMM Match : DUF125 (HMM E-Value=1.7) 29 3.6
SB_43930| Best HMM Match : ANF_receptor (HMM E-Value=0) 28 6.3
SB_17981| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41) 28 6.3
SB_4707| Best HMM Match : Toxin_17 (HMM E-Value=8.2) 28 6.3
SB_39949| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_13477| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 28 8.3
SB_16588| Best HMM Match : Tropomyosin (HMM E-Value=3.3) 28 8.3
>SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 67.7 bits (158), Expect = 8e-12
Identities = 48/152 (31%), Positives = 70/152 (46%)
Frame = +1
Query: 157 DPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYT 336
DPL A++ WI G P++K+ LGI GR++ L + ++ P A GG+ GPYT
Sbjct: 234 DPL-TVTHAVDLWIAGGMPSNKIALGIPLYGRSFTLKTANKTLDAP---ATKGGQ-GPYT 288
Query: 337 KVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDP 516
K G ++Y EIC + L DP P WV Y+D
Sbjct: 289 KEAGYIAYFEIC-----------KMGLSVTRDP-------VLVSPYGVDVNNQWVGYDDV 330
Query: 517 DTAGNKASYVKTKNLGGVSIMDLSMDDFRGLC 612
+ K +Y+K K+L G + +DDF+G C
Sbjct: 331 TSVQEKVNYIKKKSLLGAMFWAMDLDDFKGDC 362
>SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 569
Score = 66.1 bits (154), Expect = 3e-11
Identities = 55/197 (27%), Positives = 85/197 (43%), Gaps = 1/197 (0%)
Frame = +1
Query: 31 FDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGA 210
++V I ++D++N+ A+D P+ +TA + P + A YWI GA
Sbjct: 308 YEVDKIGQILDLINLMAYDL-RGMWEPETGHHTA-LEGPPGEE--LTVSFAAQYWIDKGA 363
Query: 211 PTHKLVLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEICAKLINP 390
P K+ LG+ T GR +KL +D G+ A+ G YT+ G L+Y EIC
Sbjct: 364 PASKIALGLGTYGRAFKL-ADQTRHGL-KAPANGNPTRGQYTREPGFLAYYEIC------ 415
Query: 391 NQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKAS-YVKTKNLGG 567
K+N + A + P G WV Y+D + K +K K + G
Sbjct: 416 ----------KMNLQVTSTESSAVKAPYGH-VGDLWVGYDDEYSLSLKVERVIKAKGMAG 464
Query: 568 VSIMDLSMDDFRGLCTG 618
+ +DDF+G G
Sbjct: 465 AMFWAIPLDDFKGQFCG 481
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 58.8 bits (136), Expect = 4e-09
Identities = 44/194 (22%), Positives = 86/194 (44%)
Frame = +1
Query: 31 FDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGA 210
++V + ++D +N+ +D + P P +TA + P ++ A+ YW++ G
Sbjct: 577 YEVHKLAGILDWINLMTYDLHGPWE-PYTGHHTALVGPPGDK---LTVSYAVKYWMEKGM 632
Query: 211 PTHKLVLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEICAKLINP 390
P K+ LG++ G ++L ++ + P + + G + PY E+C
Sbjct: 633 PCGKIALGMANYGHAFELSDPTKTALGAPANVNK-GRSYPYY---------ELC------ 676
Query: 391 NQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKASYVKTKNLGGV 570
K P + ++P+K Y + G W++Y+D + G K +K +NL G
Sbjct: 677 ----KLPLTKVTDNPAK--APYGY-------HGSQWIAYDDVTSLGRKVELIKKENLLGA 723
Query: 571 SIMDLSMDDFRGLC 612
+ +DDF +C
Sbjct: 724 MFWAIDLDDFGNVC 737
>SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 829
Score = 52.0 bits (119), Expect = 4e-07
Identities = 58/204 (28%), Positives = 86/204 (42%), Gaps = 12/204 (5%)
Frame = +1
Query: 31 FDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYW----- 195
+D+ I +D +N+ +D + PK +TA P D L AI YW
Sbjct: 584 YDIEGISKPLDWINVMTYDLHGTWE-PKTGHHTA--MGPDG-DKL-TLPFAIWYWMNNRD 638
Query: 196 ------IQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLS 357
I+NG P +K+VLG+ T GR + L+S + G +AG YT +G L+
Sbjct: 639 TWEKPGIRNGMPANKIVLGLGTYGRAFGLES----------AGNNGLDAGKYTGAKGFLA 688
Query: 358 YPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKA 537
Y EIC + +N K Y ++ G WV +++P + K
Sbjct: 689 YFEICKMGLTVVENNKAK------------APYGYK-------GHDWVGFDNPKSLIYKI 729
Query: 538 SYVKTKN-LGGVSIMDLSMDDFRG 606
V KN L GV + +DDF G
Sbjct: 730 DNVVKKNQLRGVMFWAIDLDDFSG 753
Score = 38.7 bits (86), Expect = 0.004
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = +1
Query: 313 GGEAGPYTKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGG 492
G +G YT +G L+Y EIC + + H K N P Y ++ G
Sbjct: 277 GVHSGKYTDAEGFLAYYEICKRGLTV------VHKNKANAP------YGYK-------GK 317
Query: 493 FWVSYEDPDTAGNKASYVKTKN-LGGVSIMDLSMDDFRG 606
W+ ++DP++ K V KN L GV + +DDF G
Sbjct: 318 DWIGFDDPNSLVYKIDNVVKKNQLRGVMFWAIDLDDFSG 356
>SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4)
Length = 184
Score = 41.1 bits (92), Expect = 8e-04
Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Frame = +1
Query: 325 GPYTKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVS 504
GPYT+ G LSY EIC + P + +V P Y + + D + WV
Sbjct: 16 GPYTRESGFLSYYEICDMM--PKMKTMKTDQSEVRAP------YGY-VKQDWAD--VWVG 64
Query: 505 YEDPDTAGNKA-SYVKTKNLGGVSIMDLSMDDFRGLCTG 618
Y+D + K +K K L G L +DDF G G
Sbjct: 65 YDDERSLQLKVEEVIKAKGLAGAMFWALDLDDFDGSSCG 103
>SB_8405| Best HMM Match : PAN (HMM E-Value=0.044)
Length = 387
Score = 35.1 bits (77), Expect = 0.055
Identities = 41/167 (24%), Positives = 61/167 (36%), Gaps = 6/167 (3%)
Frame = +1
Query: 70 NIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTG 249
N Q F Y +P+ N A+Y D + YW G P +L LG+ T
Sbjct: 187 NKQTFSYSSPKWNSM-AEYQTGFGV----DMSERETLLATYW---GTPFDRLCLGMKNTT 238
Query: 250 RTWKLDSDSEISGVPPI---HADXGGEAGPYTKVQGLLSYPEICAKL---INPNQNGKRP 411
W IS + I H + G + + S C K + N
Sbjct: 239 TNWIAVPHEGISLLTLIKKQHTQTSLDVGTWKSLLPGSSLQTGCYKQGFNVTSGINSATA 298
Query: 412 HLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKASYVKT 552
+ + PS+ G R+ G GG+W +D ++ GN+A KT
Sbjct: 299 RIGILAFPSECSGHALSRI--GFGTGGYWYGQDDENSCGNEADTSKT 343
>SB_37668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 454 YAFRLPDDXGEGGFWVSYEDPDTAGNKASYVKTKNLGGVSI 576
+ ++ PD +G V+YEDP TA + K+ G SI
Sbjct: 208 WIYKHPDGSSKGECTVTYEDPPTASAAIEWFNGKDFMGQSI 248
>SB_30230| Best HMM Match : CH (HMM E-Value=0.0035)
Length = 2440
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 493 FWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMD 594
F VS+++PD N + VK+K+ ++DLS D
Sbjct: 1796 FEVSFDEPDVITNMKTKVKSKDTVRKDLLDLSSD 1829
>SB_29945| Best HMM Match : DUF125 (HMM E-Value=1.7)
Length = 608
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = -3
Query: 616 QCKDH-ENHPWKGP*WTHRQGSLFSRN*LCFRPCQDLRKKPRSHLHHXHQEGGRHRSQNV 440
Q + H H W W H + ++R + + R PR H H++ G H +++
Sbjct: 255 QTRTHARRHAW----WEHEKAGTYTRRYIHRKDMAQTRTHPRRHAWREHKKAGTHTRRHM 310
>SB_43930| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 915
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 241 TTGRTWKLDSDSEISGVPPIHADXGGEAGPYT-KVQGLLSYPEI 369
T G+TW E G+P + A GG A P + + +LS +I
Sbjct: 119 TAGKTWNASCFCEGRGMPLVGAVIGGAASPISLNIANVLSVNDI 162
>SB_17981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1303
Score = 28.3 bits (60), Expect = 6.3
Identities = 45/202 (22%), Positives = 81/202 (40%), Gaps = 9/202 (4%)
Frame = +1
Query: 31 FDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGA 210
+D+ +I+++VD + I A+D + KE P A N P + +++
Sbjct: 171 YDLKAIVDIVDFMVIMAYD---QQSQIKE----GPCIAKAN-SPYSQTLEGVQQYLKLNI 222
Query: 211 PTHKLVLGISTTGRTW---KLDSDSEISGVPPIH------ADXGGEAGPYTKVQGLLSYP 363
+KLVLG+ G + ++D ++I + + +D G PY V L
Sbjct: 223 SNNKLVLGLPWYGYDYPCEEIDEKNDICFIKKVPFRGVNCSDAAGTQIPYATVNDL---- 278
Query: 364 EICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKASY 543
L+ G++ L+ ++ F D G V Y+DP + K
Sbjct: 279 -----LMTRTDTGRKWSLKSLSP--------YFWYSDHVG-NPHQVWYDDPSSLTFKYRI 324
Query: 544 VKTKNLGGVSIMDLSMDDFRGL 609
+L GV+I + + D+ GL
Sbjct: 325 ANMLDLKGVAIWNADLLDYSGL 346
>SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41)
Length = 1017
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 540 TSFVSGRVRIFVRNPEATFTXIIRKAEGI 454
T + GR +IF+RNP F ++ +G+
Sbjct: 640 TEYAYGRTKIFIRNPRTLFALEEKRKDGM 668
>SB_4707| Best HMM Match : Toxin_17 (HMM E-Value=8.2)
Length = 121
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 579 HDGHTAKVLCFHVTSFVSGRVRIFVRN 499
HDG + +CFH S +R+ V+N
Sbjct: 72 HDGIVPRTICFHKLSCCDDPIRVVVKN 98
>SB_39949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 447 KTFARIVDLTKMRTLSVLVGVNKFGANFWVA 355
K FAR++ T +R + VL+ + FG + W A
Sbjct: 17 KQFARLLIKTPVRIVVVLLSLGLFGVSIWEA 47
>SB_13477| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 628
Score = 27.9 bits (59), Expect = 8.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 195 DSKWCAYPQTCPWYQHHWTYVEA 263
D + C+YP T PW WT + +
Sbjct: 80 DERNCSYPTTGPWTTRPWTPISS 102
>SB_16588| Best HMM Match : Tropomyosin (HMM E-Value=3.3)
Length = 430
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 138 LRTAEPRSSTKRRRCYKLLD-SKWCAYPQTCPWYQHHWTYVEAR 266
LR + PRS ++ + K+ ++P P +HHWT E R
Sbjct: 26 LRNSTPRSKARKPLQFTSPSHGKFKSFPVKSPVRRHHWTLEEER 69
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,079,404
Number of Sequences: 59808
Number of extensions: 525161
Number of successful extensions: 1290
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1281
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -