Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_F13
(696 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si... 58 4e-09
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si... 55 4e-08
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si... 54 7e-08
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 52 3e-07
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si... 51 6e-07
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si... 48 8e-06
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si... 48 8e-06
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si... 46 2e-05
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si... 45 6e-05
At4g17880.1 68417.m02665 basic helix-loop-helix (bHLH) family pr... 33 0.14
At3g16460.2 68416.m02097 jacalin lectin family protein contains ... 31 0.73
At3g16460.1 68416.m02098 jacalin lectin family protein contains ... 31 0.73
At1g30220.1 68414.m03697 sugar transporter family protein simila... 29 2.2
At4g34350.1 68417.m04881 LytB family protein contains Pfam profi... 28 5.1
At4g25390.2 68417.m03653 protein kinase family protein contains ... 28 6.8
At4g25390.1 68417.m03652 protein kinase family protein contains ... 28 6.8
At4g20190.1 68417.m02952 hypothetical protein 27 9.0
At2g46530.2 68415.m05803 transcriptional factor B3 family protei... 27 9.0
At2g46530.1 68415.m05802 transcriptional factor B3 family protei... 27 9.0
>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 379
Score = 58.4 bits (135), Expect = 4e-09
Identities = 52/196 (26%), Positives = 80/196 (40%)
Frame = +1
Query: 22 SIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQ 201
S+ + V ++ + +D VN+ A+D+Y P + + A ++ P N P + DA WIQ
Sbjct: 188 SVLYPVSAVASSLDWVNLMAYDFYGPGWS-RVTGPPAALFDPSNAGP--SGDAGTRSWIQ 244
Query: 202 NGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEICAKL 381
G P K VLG G W+L + + S P G P G + Y +I +
Sbjct: 245 AGLPAKKAVLGFPYYGYAWRLTNANSHSYYAP---TTGAAISP----DGSIGYGQIRKFI 297
Query: 382 INPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKASYVKTKNL 561
++ NG S G Y + G W+ Y+D + K Y K + L
Sbjct: 298 VD---NGATTVYN-----STVVGDYCY-------AGTNWIGYDDNQSIVTKVRYAKQRGL 342
Query: 562 GGVSIMDLSMDDFRGL 609
G + DD GL
Sbjct: 343 LGYFSWHVGADDNSGL 358
>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 362
Score = 55.2 bits (127), Expect = 4e-08
Identities = 50/179 (27%), Positives = 82/179 (45%)
Frame = +1
Query: 31 FDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGA 210
+ V +I + +D VNI A+D+Y P +P A ++ P N ++ D+ ++ W++
Sbjct: 179 YPVQAIADNLDFVNIMAYDFYGPGWSPVTGP-PAALFDPSNPAG-RSGDSGLSKWLEAKL 236
Query: 211 PTHKLVLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEICAKLINP 390
P K VLG S G W L+ D+E +G D + G G ++Y +I +I+
Sbjct: 237 PAKKAVLGFSYCGWAWTLE-DAENNGY-----DAATD-GAAISSDGSITYAKIRNYIID- 288
Query: 391 NQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKASYVKTKNLGG 567
NG +DP+ G Y + G W+ Y+D + +K Y K K L G
Sbjct: 289 --NG----AATFHDPAV-IGFYCY-------VGTTWIGYDDNQSIVSKVRYAKLKGLLG 333
>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 332
Score = 54.4 bits (125), Expect = 7e-08
Identities = 47/175 (26%), Positives = 75/175 (42%)
Frame = +1
Query: 10 NVNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAIN 189
+V + + V + +D VNI A+D+Y P + K TA ++ N + + D+ +
Sbjct: 175 SVYKTFTYPVQVMRESLDWVNIIAYDFYGPVSSSKFTVPTAGLHVSSNNEG-PSGDSGLK 233
Query: 190 YWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEI 369
WI++G P K VLG S G W L +D + +G A ++ G ++Y +I
Sbjct: 234 QWIKDGLPEKKAVLGFSYVGWAWTLQNDKD-TGYNAAAAGVAKSEDDVSE-DGSINYAQI 291
Query: 370 CAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNK 534
N+ + KV DP K G Y F W+ YED + K
Sbjct: 292 -------NKFIRDEEAAKVYDP-KVVGHYCFAKK-------IWIGYEDTQSVEAK 331
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 52.4 bits (120), Expect = 3e-07
Identities = 48/189 (25%), Positives = 79/189 (41%)
Frame = +1
Query: 31 FDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGA 210
+ V +I N +D +N+ A+D+Y P + A +Y P + ++ D+ + W + G
Sbjct: 170 YPVLAISNSLDWINLMAYDFYGPGWSTVTGP-PASLYLPTDG---RSGDSGVRDWTEAGL 225
Query: 211 PTHKLVLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEICAKLINP 390
P K VLG G W L +D +++G GP G +SY ++ +++
Sbjct: 226 PAKKAVLGFPYYGWAWTL-ADPDVNGY------DANTTGPAISDDGEISYRQLQTWIVD- 277
Query: 391 NQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKASYVKTKNLGGV 570
NG KV+D G Y + G W+ Y+ + K Y K K L G
Sbjct: 278 --NG----ATKVHD-DMMVGDYCY-------AGTTWIGYDSEKSIVTKVIYAKQKGLLGY 323
Query: 571 SIMDLSMDD 597
+ DD
Sbjct: 324 FSWHVGGDD 332
>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 261
Score = 51.2 bits (117), Expect = 6e-07
Identities = 51/196 (26%), Positives = 75/196 (38%)
Frame = +1
Query: 10 NVNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAIN 189
N N +Y V I L+D VNI+A+D+Y P + T P A + + D+ +
Sbjct: 77 NYNGVVY-PVKFISELLDWVNIKAYDFY----GPGCTEVTGPPAALYLQSDGPSGDSGVK 131
Query: 190 YWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEI 369
WI G P K VLG G W L P H GP G +SY ++
Sbjct: 132 DWIDAGLPAEKAVLGFPYYGWAWTLAD-------PKNHGYYVDTTGPAISDDGEISYSQL 184
Query: 370 CAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKASYVK 549
+++ V+D + G Y + G W+ Y+ ++ K Y K
Sbjct: 185 KTWIVDNKAT-------TVHD-NIVIGDYCY-------AGTTWIGYDSEESIVTKVIYAK 229
Query: 550 TKNLGGVSIMDLSMDD 597
K L G + DD
Sbjct: 230 QKGLLGYFSWQVGGDD 245
>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 366
Score = 47.6 bits (108), Expect = 8e-06
Identities = 33/116 (28%), Positives = 52/116 (44%)
Frame = +1
Query: 22 SIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQ 201
S+ V ++ + +D VN+ A+D+Y + + AP+Y P P + DA + W Q
Sbjct: 186 SVLHPVNAVADSLDWVNLVAYDFYE-SGSSRVTCSPAPLYDPITTGP--SGDAGVRAWTQ 242
Query: 202 NGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEI 369
G P K VLG G W L +D++ H +GP G + Y +I
Sbjct: 243 AGLPAKKAVLGFPLYGYAWCL-TDAK------NHNYYANSSGPAISPDGSIGYDQI 291
>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 365
Score = 47.6 bits (108), Expect = 8e-06
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 1/182 (0%)
Frame = +1
Query: 25 IYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQN 204
+ + V +I + +D VNI A+D+Y P +P A + P N ++ ++ + W+
Sbjct: 185 VEYPVKAIADNLDFVNIMAYDFYGPGWSPVTGPPAALFHDPSN-PAGRSGNSGLRKWLDE 243
Query: 205 G-APTHKLVLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEICAKL 381
P K VLG G W L+ D+E +G A G P G ++Y +I +
Sbjct: 244 AKLPPKKAVLGFPYCGWAWTLE-DAENNGYDA--ATDGAAISP----DGSITYAKIRNYI 296
Query: 382 INPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKASYVKTKNL 561
++ NG +DP+ G Y + G W+ Y+D + K Y K L
Sbjct: 297 VD---NG----AATFHDPAV-IGFYCY-------VGNTWIGYDDNQSIVYKVKYAKFTGL 341
Query: 562 GG 567
G
Sbjct: 342 LG 343
>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 289
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Frame = +1
Query: 19 SSIYFDVPSIINLVDIVNIQAFDYY--TPERNPKEADYTAPIYAPQNRDPLQNADAAINY 192
+S+ + V +I +D VN+ A+++Y T E P A +Y P + P D + +
Sbjct: 157 NSVSYPVQAINRSLDWVNLIAYEFYGLTTEIGPP-----AGLYDPSIKGPC--GDTGLKH 209
Query: 193 WIQNGAPTHKLVLGISTTGRTWKLDSDSE 279
W++ G P K V G G +W LD D +
Sbjct: 210 WLKAGLPEKKAVFGFPYVGWSWTLDDDKD 238
>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 363
Score = 44.8 bits (101), Expect = 6e-05
Identities = 51/200 (25%), Positives = 78/200 (39%), Gaps = 1/200 (0%)
Frame = +1
Query: 13 VNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQN-RDPLQNADAAIN 189
V S+ + + I +D VN+ A+D+Y+ A ++ P N + P D +
Sbjct: 174 VYDSVSYPIREIKKKLDWVNLIAYDFYSSSTT---IGPPAALFDPSNPKGPC--GDYGLK 228
Query: 190 YWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEI 369
WI+ G P K VLG G TW L S ++ + T +G ++Y +I
Sbjct: 229 EWIKAGLPAKKAVLGFPYVGWTWSLGSGND-----------AATSRVATSAEGSINYDQI 277
Query: 370 CAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKASYVK 549
+++ R V D S G Y F G + Y+D + K Y K
Sbjct: 278 KRLIVDHK-------ARPVFD-STVVGDYCF-------AGTSLIGYDDHQSVVAKVKYAK 322
Query: 550 TKNLGGVSIMDLSMDDFRGL 609
K L G + DD GL
Sbjct: 323 QKGLLGYFSWHVGADDNFGL 342
>At4g17880.1 68417.m02665 basic helix-loop-helix (bHLH) family
protein bHLH protein, Arabidopsis thaliana,
PATCHX:E255557
Length = 589
Score = 33.5 bits (73), Expect = 0.14
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +1
Query: 427 NDPSKRFGTYAFRLPDDXGEG--GFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDF 600
N+ FG++AF L D GE G W+S + +G A+ V N G S +
Sbjct: 253 NNGGGEFGSWAFNLNPDQGENDPGLWISEPNGVDSGLVAAPV-MNNGGNDSTSNSDSQPI 311
Query: 601 RGLCTGDNIRS*GPQ 645
LC G ++ + P+
Sbjct: 312 SKLCNGSSVENPNPK 326
>At3g16460.2 68416.m02097 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase binding protein [Brassica napus]
GI:1711296, GI:1655824, myrosinase-binding protein
homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
profile PF01419 jacalin-like lectin family
Length = 647
Score = 31.1 bits (67), Expect = 0.73
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +1
Query: 205 GAPTHKL-VLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEICAKL 381
G+ KL G ST G +W D S+ GV I+A GGE Y K + L
Sbjct: 249 GSGAQKLEAQGNSTGGTSW--DDGSDYDGVTKIYASYGGEGIQYVKFDYVKGGVTKQGVL 306
Query: 382 INPNQNGKRPHLRKVNDPSK 441
Q+ + P +N P +
Sbjct: 307 HGKQQSRQNPREFVINHPDE 326
>At3g16460.1 68416.m02098 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase binding protein [Brassica napus]
GI:1711296, GI:1655824, myrosinase-binding protein
homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
profile PF01419 jacalin-like lectin family
Length = 705
Score = 31.1 bits (67), Expect = 0.73
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +1
Query: 205 GAPTHKL-VLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEICAKL 381
G+ KL G ST G +W D S+ GV I+A GGE Y K + L
Sbjct: 249 GSGAQKLEAQGNSTGGTSW--DDGSDYDGVTKIYASYGGEGIQYVKFDYVKGGVTKQGVL 306
Query: 382 INPNQNGKRPHLRKVNDPSK 441
Q+ + P +N P +
Sbjct: 307 HGKQQSRQNPREFVINHPDE 326
>At1g30220.1 68414.m03697 sugar transporter family protein similar
to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
[Homo sapiens]; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 580
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 158 ILYKTPTLL*ITGFKMVRLPTNLSLVSAPLDVRGSSI 268
++Y +PT++ + GF R LSLV+A L+ GS I
Sbjct: 294 VMYYSPTIVQLAGFASNRTALLLSLVTAGLNAFGSII 330
>At4g34350.1 68417.m04881 LytB family protein contains Pfam profile:
PF02401 LytB protein
Length = 466
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 223 LVLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEICAK 378
LV+G + T L SE G+P D GP K+ L Y E+ K
Sbjct: 372 LVVGGWNSSNTSHLQEISEARGIPSYWIDSEKRIGPGNKIAYKLHYGELVEK 423
>At4g25390.2 68417.m03653 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 497
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +1
Query: 385 NPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKASYVKTKNLG 564
N + + +RP R+ + S R T +F + G+GGF V + + G + VK + G
Sbjct: 74 NASSSPRRPSPREFSYSSLRRATGSFSQANRLGQGGFGVVFRGTISGGENVA-VKVMDSG 132
Query: 565 GV 570
+
Sbjct: 133 SL 134
>At4g25390.1 68417.m03652 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 651
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +1
Query: 385 NPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKASYVKTKNLG 564
N + + +RP R+ + S R T +F + G+GGF V + + G + VK + G
Sbjct: 74 NASSSPRRPSPREFSYSSLRRATGSFSQANRLGQGGFGVVFRGTISGGENVA-VKVMDSG 132
Query: 565 GV 570
+
Sbjct: 133 SL 134
>At4g20190.1 68417.m02952 hypothetical protein
Length = 389
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/88 (21%), Positives = 34/88 (38%)
Frame = -1
Query: 618 SSAKTTKIIHGKVHDGHTAKVLCFHVTSFVSGRVRIFVRNPEATFTXIIRKAEGIGPKTF 439
S+ +K I+ DG LC ++ F G+ R +++FT R ++
Sbjct: 195 SNTANSKSINS-FEDGFKCSALCLYLPGFSKGKPVRSSRKGDSSFT---RTTTMTSSQSM 250
Query: 438 ARIVDLTKMRTLSVLVGVNKFGANFWVA 355
AR + LS + +F W +
Sbjct: 251 ARTASIRDTAVLSARASLERFECGSWTS 278
>At2g46530.2 68415.m05803 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profiles: PF02309 AUX/IAA family, PF02362 B3 DNA binding
domain
Length = 514
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 362 QKFAPNLLTPTKTESVLIFVRSTILANVLG-PMPSAFL 472
+ F+P+ LTPT T+ RS ++ + G P+ S+FL
Sbjct: 263 EPFSPSALTPTPTQQQSKSKRSRPISEITGSPVASSFL 300
>At2g46530.1 68415.m05802 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profiles: PF02309 AUX/IAA family, PF02362 B3 DNA binding
domain
Length = 601
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 362 QKFAPNLLTPTKTESVLIFVRSTILANVLG-PMPSAFL 472
+ F+P+ LTPT T+ RS ++ + G P+ S+FL
Sbjct: 350 EPFSPSALTPTPTQQQSKSKRSRPISEITGSPVASSFL 387
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,273,979
Number of Sequences: 28952
Number of extensions: 370367
Number of successful extensions: 1016
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1487069504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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