Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_F11
(523 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC330.06c |||thioredoxin peroxidase|Schizosaccharomyces pombe|... 67 2e-12
SPBC1773.02c |||thioredoxin peroxidase|Schizosaccharomyces pombe... 48 1e-06
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k... 28 0.73
SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatas... 27 2.2
SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ... 26 3.9
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 25 5.2
SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces ... 25 5.2
SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharom... 25 5.2
SPBP4H10.03 |oxa102|oxa1, oxa1-2, oxa1sp2|mitochondrial inner me... 25 6.8
SPCP31B10.04 |||conserved fungal protein|Schizosaccharomyces pom... 25 6.8
SPAC926.09c |fas1||fatty acid synthase beta subunit Fas1|Schizos... 25 9.0
SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomy... 25 9.0
>SPCC330.06c |||thioredoxin peroxidase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 156
Score = 66.9 bits (156), Expect = 2e-12
Identities = 33/82 (40%), Positives = 49/82 (59%)
Frame = +2
Query: 77 IKVGDMLPSLDLFEDSPANKVNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKM 256
+ VG LP + L+E+ P V E + K ++ VPGAFTP CS + +PGY+ N +
Sbjct: 2 VAVGSTLPKVTLWENKPEEVV---EFPSQGKFIIVGVPGAFTPPCS-SQVPGYIANEKQF 57
Query: 257 KSEGVSEIVCVSVNDPYVMAAW 322
++G+S I V+VND +V AW
Sbjct: 58 AAKGISGIYVVAVNDVFVTKAW 79
>SPBC1773.02c |||thioredoxin peroxidase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 195
Score = 47.6 bits (108), Expect = 1e-06
Identities = 31/98 (31%), Positives = 52/98 (53%)
Frame = +2
Query: 77 IKVGDMLPSLDLFEDSPANKVNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKM 256
I+VGD++P + L D + +ITA K +V+FA P A TPGC+K G+ N K+
Sbjct: 46 IQVGDVIPDITL-PDEDGTSIRLRDITANKGLVIFAYPKASTPGCTKQGC-GFRDNYPKI 103
Query: 257 KSEGVSEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADP 370
++ E++ +S + A+ + N +L+DP
Sbjct: 104 QASDY-EVLGLSFDTSKAQKAFKDKQNF--PYHLLSDP 138
>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 836
Score = 28.3 bits (60), Expect = 0.73
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 14 STFNNGVYVRALHTSKIAMAPIKVGDMLPSLDL 112
STFN+G+ +RAL AP+ +L DL
Sbjct: 382 STFNSGISLRALRKEMGNTAPVSSNQLLKDADL 414
>SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatase
Ppe1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 2.2
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 471 VEDWTVEPDGTGW 509
+E WTV P G GW
Sbjct: 200 IESWTVSPRGAGW 212
>SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 803
Score = 25.8 bits (54), Expect = 3.9
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = -1
Query: 478 SSTLLSMITSEKRFERNPPNGGRFVPRSRALMNAPIWISK 359
S+T S I+ + +PPNG +FV ++ +++ +
Sbjct: 135 SATTSSPISRNPEYSVSPPNGSKFVKNEDEAYDSDLYVEE 174
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = +2
Query: 230 GYVQNADKMKSEGVSEIVCVSVNDPYVMAAWGAQH-----NTKGKVRMLAD 367
GY+ +++ + EG + + V++P A W +H N + + +L D
Sbjct: 329 GYLHSSELLYPEGTEQQIISLVDEPNQNALWIIEHEHSQDNNRSNIELLKD 379
>SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 580
Score = 25.4 bits (53), Expect = 5.2
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 264 SLFILSAFCTYPGK*VLEHPGVNAPGTANKTTFFPAVISQVF 139
S+F +AF +Y G E+ G+ A T N FP + QVF
Sbjct: 274 SVFSTAAF-SYAGT---EYIGIAASETKNPAKAFPKAVKQVF 311
>SPBC211.03c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1462
Score = 25.4 bits (53), Expect = 5.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 318 LGVPSTTPRERYECLLIQIGAFIKALDLGTNLPP 419
L +PSTTPRER + + + +LDL + P
Sbjct: 390 LHIPSTTPRERN--VETSLHKVVSSLDLSEEISP 421
>SPBP4H10.03 |oxa102|oxa1, oxa1-2, oxa1sp2|mitochondrial inner
membrane translocase Oxa102|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 409
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 373 IWISKHSYLSLGVVLGTPSGHNIRIVHRHAYYFRN 269
I S S+ S+ L G IR +H H +F+N
Sbjct: 9 IKFSSKSHYSVSCFLIATQGAKIRQIHTHNTFFKN 43
>SPCP31B10.04 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 287
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 266 GVSEIVCVS--VNDPYVMAAWGAQHNTKGKVRMLADPNWRIHQSS 394
GV ++ V +ND ++AA N+KG++ + A+ W +H S
Sbjct: 108 GVDNLLMVVSYLNDSGLIAATKKVQNSKGEIMLKANKGW-LHDDS 151
>SPAC926.09c |fas1||fatty acid synthase beta subunit
Fas1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2073
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 351 TFPLVLCWAPQAAITYGSFTDTHT 280
TFP+VL W A + SF D H+
Sbjct: 715 TFPIVLQWTGGRAGGHHSFEDFHS 738
>SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 800
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 435 SKRFSLVIIDSKVEDWTVEPDGTGWSC 515
S RF V D+ + W + P + W C
Sbjct: 507 SNRFITVGTDATLRIWALLPGSSAWKC 533
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,338,000
Number of Sequences: 5004
Number of extensions: 49556
Number of successful extensions: 148
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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